| structure name | WUS-HD BOUND TO TGAA DNA (Protein WUSCHEL) |
| reference | Sloan et al. 'Nat 11 2223 2020 |
| source | Arabidopsis thaliana |
| experiment | X-ray (resolution=1.57, R-factor=0.189) |
| structural superfamily | Homeodomain-like; |
| sequence family | Homeobox domain; |
| multimeric complexes | 6ryd_EF 6ryi_AB 6ryi_DE 6ryl_ABC 6ryl_DE |
| redundant complexes | 6ryi_D
 6ryl_A
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RFYQNAR |
Estimated binding specificities ?
| readout + contact |  |
A | 16 44 1 0 0 96 0 C | 51 0 7 0 96 0 9 G | 22 22 0 0 0 0 14 T | 7 30 88 96 0 0 73scan! |
Dendrogram of similar interfaces ?
matrix format--------------FTYA--QTNA--ATRG L +6ryd_F +---------------3 ----------------YA--QTNA--AARG L +----7 +6wig_A ! ! HTRA------------NC--ATAT--AT-- L +-10 +---------------1le8_B ! ! --------------LA--RTET--QT---- L +-11 +--------------------7m5w_A ! ! ------NT---------------------- +-12 +----------------------7tve_F ! ! --RT------------NC--STNA--RG-- L ! ! +1mnm_C ! +----------------------4 ----------------NT----NA--IARG L ! +1b72_B ! ----------------NC--ICNA--RGRG L ! +4xrm_B +-13 +---------------1 ----------------NT----NA--ITRG ! ! ! +5zjt_B ! ! +-6 ----------------VA--QTNA------ L ! ! ! ! +---5hod_A ! ! +-8 +-----------5 --------------RCVA--CTNA--QA-- L ! ! ! ! +---7xrc_C +-14 ! ! ! --------------RTVA--ITNA--MCRG L ! ! +-----9 +-----------------1yrn_A ! ! ! ----------------VT--KGNA----KA L ! ! ! +2lkx_A -15 ! +------------------2 ----------------IA--QCNA--YA-- L ! ! +1nk2_P ! ! --------RCET----SA--QAKT------ L ! +-------------------------6qec_A ! ----DT--RGRCTT--KT------------ L +---------------------------2o9l_A |
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updated Wed Dec 18 05:39:58 2024