6ryl_DE : 3D-footprint complex

structure name	WUS-HD BOUND TO TAAT DNA
reference	Sloan et al. 'Nat 11 2223 2020
source	Arabidopsis thaliana
experiment	X-ray (resolution=2.63, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	6ryd_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ryl_D interface=2,50,53,54, tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkk > 6ryl_E interface=2,50,53,54, tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkkr
interface signature	RYQN/RYQN

Estimated binding specificities ?

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# IC=11.962 IC/col=0.997 n_of_columns=12

specificity:

A |  78  11  87  96   0   0   2  78   0   2  44  96
C |   2  66   2   0  96   2  87   2   0   5   0   0
G |   2  14   2   0   0  94   2   2   0   5  52   0
T |  14   5   5   0   0   0   5  14  96  84   0   0

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updated Sat Dec 14 19:58:42 2024