6ryl_DE : 3D-footprint complex

structure name	WUS-HD BOUND TO TAAT DNA
reference	Sloan et al. 'Nat 11 2223 2020
source	Arabidopsis thaliana
experiment	X-ray (resolution=2.63, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	6ryd_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ryl_D interface=2,50,53,54, tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkk > 6ryl_E interface=2,50,53,54, tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkkr
interface signature	RYQN/RYQN

Estimated binding specificities ?

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# IC=11.662 IC/col=0.972 n_of_columns=12

specificity:

A |  80  12  84  96   0   2   0  79   0   4  24  91
C |   2  73   6   0  96   3  91   4   0   6   2   3
G |   2   9   4   0   0  89   2   2   0   4  68   0
T |  12   2   2   0   0   2   3  11  96  82   2   2

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updated Thu Jul 31 01:30:46 2025