6ryl_DE : 3D-footprint complex

structure name	WUS-HD BOUND TO TAAT DNA
reference	Sloan et al. 'Nat 11 2223 2020
source	Arabidopsis thaliana
experiment	X-ray (resolution=2.63, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	6ryd_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ryl_D interface=2,50,53,54, tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkk > 6ryl_E interface=2,50,53,54, tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkkr
interface signature	RYQN/RYQN

Estimated binding specificities ?

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# IC=11.346 IC/col=0.946 n_of_columns=12

specificity:

A |   0   0  93  96   8   6   0   0   0   2   2  14
C |   1  69   0   0  10   3  89   0   0   0  46   6
G |   2   0   3   0  10  81   6  96   0   3  32   6
T |  93  27   0   0  68   6   1   0  96  91  16  70

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updated Tue Sep 10 20:16:29 2024