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legend  pdf

structure nameSTRUCTURE OF TBP BOUND TO C-C MISMATCH CONTAINING TATA SITE
(TATA-box-binding protein 1)
referenceSchumacher et al. Nature 587 291 2020
sourceArabidopsis thaliana
experimentX-ray (resolution=2.40, R-factor=0.215)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes1vol_AB
reference complex1qna_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFALFVTNVFPLFVT

Estimated binding specificities ?

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# IC=7.942 IC/col=0.993 n_of_columns=8 specificity:   
A |   9  96   0  96  76  67  96   0
C |  11   0   0   0   0   9   0  87
G |   9   0   0   0  11  11   0   9
T |  67   0  96   0   9   9   0   0
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updated Sat Aug 2 14:25:46 2025