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structure nameSTRUCTURE OF TBP BOUND TO C-C MISMATCH CONTAINING TATA SITE
(TATA-box-binding protein 1)
referenceSchumacher et al. Nature 587 291 2020
sourceArabidopsis thaliana
experimentX-ray (resolution=2.40, R-factor=0.215)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFALFVTNVFPLFVT

Estimated binding specificities ?

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# IC=8.090 IC/col=1.011 n_of_columns=8 specificity:   
A |   0   0  10   0   0  96   0  64
C |  86   0  10   0   0   0   0  10
G |  10   0  12  11   0   0   0  10
T |   0  96  64  85  96   0  96  12
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updated Tue Dec 17 07:18:29 2024