6uwk_A : 3D-footprint complex

structure name	ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE WITH IMPROVED STABILITY AND FULLY ALTERED SPECIFICITY TARGETING HUMAN CHROMOSOME 11 TRANS INTEGRATION SITE (I-ONUI-E-THERM-HCHR11V3)
reference	Stoddard et al. Structure 28 760 2020
source	SYNTHETIC CONSTRUCT
experiment	X-ray (resolution=2.53, R-factor=0.239)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
reference complex	6uwj_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6uwk_A interface=18,22,24,26,28,29,34,36,40,66,74,76,134,174,176,178,180,189,191,197,217,219,221,223,226,228,230,234, assinpwiltgfadaegSfllRiRkYsQTrvgyLtElgfQitlhnkdksileniqstwgvgvianSgdnavslKvTrfedlkviidhfekyplitqkyadymlfkqafnvmenkehltiegikelvrikaklnWgltdelkkafpeiiskerslinknipnfkwlagftsgdgCfFvNlSkkktklgvQvKlvfsiSqhirdknlmnslitylgcgYiKkKnKseFsWlEfvvTkfsdirdkiipffqeytligtklkdfedwckvaklieekkhlteegldeikkiklnmnkg
interface signature	SRRYQTLEQSKTWCFNSQKSYKKKFWET

Estimated binding specificities ?

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# IC=21.668 IC/col=1.083 n_of_columns=20

specificity:

A |   9  96   0  96  92   0   0   4   0  86   9  24  73   0   0   0   0  96   0   0
C |   4   0   0   0   0   0   0  79   0   1  21  24   9   0   0   0   0   0   0   0
G |  79   0  96   0   4  96  10   9  96   9   4  24   0  96   0  96  96   0  96  96
T |   4   0   0   0   0   0  86   4   0   0  62  24  14   0  96   0   0   0   0   0

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updated Fri Sep 13 02:29:25 2024