6uwk_A : 3D-footprint complex

structure name	ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE WITH IMPROVED STABILITY AND FULLY ALTERED SPECIFICITY TARGETING HUMAN CHROMOSOME 11 TRANS INTEGRATION SITE (I-ONUI-E-THERM-HCHR11V3)
reference	Stoddard et al. Structure 28 760 2020
source	SYNTHETIC CONSTRUCT
experiment	X-ray (resolution=2.53, R-factor=0.239)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
reference complex	6uwj_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6uwk_A interface=18,22,24,26,28,29,34,36,40,66,74,76,134,174,176,178,180,189,191,197,217,219,221,223,226,228,230,234, assinpwiltgfadaegSfllRiRkYsQTrvgyLtElgfQitlhnkdksileniqstwgvgvianSgdnavslKvTrfedlkviidhfekyplitqkyadymlfkqafnvmenkehltiegikelvrikaklnWgltdelkkafpeiiskerslinknipnfkwlagftsgdgCfFvNlSkkktklgvQvKlvfsiSqhirdknlmnslitylgcgYiKkKnKseFsWlEfvvTkfsdirdkiipffqeytligtklkdfedwckvaklieekkhlteegldeikkiklnmnkg
interface signature	SRRYQTLEQSKTWCFNSQKSYKKKFWET

Estimated binding specificities ?

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# IC=20.766 IC/col=1.038 n_of_columns=20

specificity:

A |   8  96   0  96  80   0   1   5   0  88  15  24  61   0   0   0   0  96   0   0
C |   2   0   0   0   0   0   0  81   0   0  34  24   8   0   0   0   0   0   0   0
G |  82   0  96   0  16  96  37   5  96   8   5  24  22  96   0  96  96   0  96  96
T |   4   0   0   0   0   0  58   5   0   0  42  24   5   0  96   0   0   0   0   0

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updated Tue Dec 17 07:28:30 2024