6wc5_CDN : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A TERNARY MEF2B/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX
reference	Chen et al. J.Mol.Biol. 432 5499 2020
source	HOMO SAPIENS
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	SRF-like;
reference complex	1n6j_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6wc5_C interface=2,14,22, gRkkiqisrildqRnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr > 6wc5_D interface=2,18,22, gRkkiqisrildqrnrqVtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr > 6wc5_N interface=3,44,45,48,49,52, kpRvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvKIwfQNrrYksk
interface signature	RRK/RVK/RKIQNY

Estimated binding specificities ?

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# IC=9.883 IC/col=0.659 n_of_columns=15

specificity:

A |   0   0  68  24  24  24  24  24  13   0  91  84  96   6  82
C |  96   4  15  24  24  24  24  24   4   0   0   4   0   4   4
G |   0   0   9  24  24  24  24  24  75  96   5   4   0  82   6
T |   0  92   4  24  24  24  24  24   4   0   0   4   0   4   4

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updated Tue Sep 10 22:53:13 2024