6wc5_CDN : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A TERNARY MEF2B/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX
reference	Chen et al. J.Mol.Biol. 432 5499 2020
source	HOMO SAPIENS
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	SRF-like;
reference complex	1n6j_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6wc5_C interface=2,14,22, gRkkiqisrildqRnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr > 6wc5_D interface=2,18,22, gRkkiqisrildqrnrqVtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr > 6wc5_N interface=3,44,45,48,49,52, kpRvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvKIwfQNrrYksk
interface signature	RRK/RVK/RKIQNY

Estimated binding specificities ?

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# IC=9.679 IC/col=0.645 n_of_columns=15

specificity:

A |   5   5   0   5   0   0   5  24  24  24  24  24   5  90   0
C |   5  81   0   6   5  96  75  24  24  24  24  24  10   0   0
G |   6   5   0   5   1   0   5  24  24  24  24  24   6   6  96
T |  80   5  96  80  90   0  11  24  24  24  24  24  75   0   0

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updated Thu Jul 31 04:21:09 2025