| structure name | WHEAT DWARF VIRUS REP DOMAIN COMPLEXED WITH A SINGLE-STRANDED DNA 8- MER COMPRISING THE CLEAVAGE SITE (Replication-associated protein) |
| reference | Pornschloegl et al. 'Nucleic 49 1046 2021 |
| source | Wheat dwarf virus |
| experiment | X-ray (resolution=2.61, R-factor=0.191) |
| structural superfamily | Origin of replication-binding domain, RBD-like; |
| sequence family | Geminivirus Rep catalytic domain; |
| multimeric complexes | 6we1_AD |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format--------FCTAPT----------PA------HANAIAQC----KCDC----QCVC------ +--------6we1_D +---------1 ------WTVCTA--NT------AT----------WTLTST--ACRC--ST--EADANCEAKC L +---3 +--------7kij_A ! ! KTTTTC-------------------------------------------------------- +--4 +------------------1ksy_A ! ! ------WTVCTA--NT------FT--KA------------ACKC----------NC------ L ! ! +---------6wdz_D +-5 +------------2 --------------------RG---------------------------------------- L ! ! +---------4gdf_A --6 ! --------TAFC----RCFA--------DA----RA--EG--ACRCNC--MCAC-------- L ! +-------------------------6dg0_A ! --YG--------------------------QGRGWAEGHTAG-------------------- L +--------------------------4er8_A |
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updated Sat Jan 10 12:36:29 2026