6wig_AB : 3D-footprint complex

structure name	STRUCTURE OF STENOFOLIA PROTEIN HD DOMAIN BOUND WITH DNA
reference	Pathak et al. 'Acta 77 1050 2021
source	MEDICAGO TRUNCATULA
experiment	X-ray (resolution=2.10, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	6wig_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6wig_A interface=8,55,58,59,62,63, aavvvssRwnptpeqlraleelyrrgtrtpsaeqiqqitaqlrkfgkiegknvfYwfQNhkARerqkrrrqmesaaaefdsaie > 6wig_B interface=5,52,55,56,60, vvssRwnptpeqlraleelyrrgtrtpsaeqiqqitaqlrkfgkiegknvfYwfQNhkaRerqkrrrq
interface signature	RYQNAR/RYQNR

Estimated binding specificities ?

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# IC=12.070 IC/col=0.928 n_of_columns=13

specificity:

A |   4   0   0  96  62   5  96  24  72   0   0  96   8
C |   4   0   0   0  12  75   0  24   8   0  96   0  14
G |   4   0  96   0   8   4   0  24  12   0   0   0  12
T |  84  96   0   0  14  12   0  24   4  96   0   0  62

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updated Thu Jul 31 04:51:55 2025