6xg8_AB : 3D-footprint complex

structure name	ISCTH4 TRANSPOSASE, PRE-CLEAVED COMPLEX, PCC
reference	Kosek et al. 'Embo 40 e105666 2021
experiment	X-ray (resolution=3.50, R-factor=?)
structural superfamily	Ribonuclease H-like;
reference complex	6xg8_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6xg8_A interface=54,64,66,69,86,88,100,102,121,122,137,138,139,142,357,358,360, iitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgyekYesteeaksnYrNgyTsktlkssvgqveidipRdRnaefepkivprYkRdiseienkiiamyargmsTReineqiqeiygfevSAEmvSkitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefardlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntieslnssyrrinksrTVfPgdqsllksiylatvkitskwtmryknwglilgqlqimfegr > 6xg8_B interface=216,219,224,225,228,293, kriitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgdiseienkiiamyargmstreineqiqeiygfevsaemvskitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntLkyVsdkdRKefArdlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntiEslnssyrrinksrtvfpgdqsllksiylatvkitskwtmryknwglilgqlqimfegr
interface signature	YYNTRRYRTRSAESTVP/LVRKAE

Estimated binding specificities ?

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# IC=18.997 IC/col=0.760 n_of_columns=25

specificity:

A |   1   3   0  64   0  96   0  95  66   3  24  24  24  24   7   4   0  96   0  74   0  24  24  24   0
C |   3   7   0  11  96   0  96   1  12  93  24  24  24  24   5   1   0   0  96   7  96  24  24  24  75
G |   3   1   0  11   0   0   0   0   9   0  24  24  24  24   8   1   0   0   0  10   0  24  24  24   0
T |  89  85  96  10   0   0   0   0   9   0  24  24  24  24  76  90  96   0   0   5   0  24  24  24  21

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updated Thu Jul 31 06:06:42 2025