6xg8_AB : 3D-footprint complex

structure name	ISCTH4 TRANSPOSASE, PRE-CLEAVED COMPLEX, PCC
reference	Kosek et al. 'Embo 40 e105666 2021
experiment	X-ray (resolution=3.50, R-factor=?)
structural superfamily	Ribonuclease H-like;
reference complex	6xg8_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6xg8_A interface=54,64,66,69,86,88,100,102,121,122,137,138,139,142,357,358,360, iitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgyekYesteeaksnYrNgyTsktlkssvgqveidipRdRnaefepkivprYkRdiseienkiiamyargmsTReineqiqeiygfevSAEmvSkitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefardlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntieslnssyrrinksrTVfPgdqsllksiylatvkitskwtmryknwglilgqlqimfegr > 6xg8_B interface=216,219,224,225,228,293, kriitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgdiseienkiiamyargmstreineqiqeiygfevsaemvskitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntLkyVsdkdRKefArdlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntiEslnssyrrinksrtvfpgdqsllksiylatvkitskwtmryknwglilgqlqimfegr
interface signature	YYNTRRYRTRSAESTVP/LVRKAE

Estimated binding specificities ?

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# IC=18.761 IC/col=0.750 n_of_columns=25

specificity:

A |  29  24  24  24   0   6   0   0  96  90  76  24  24  24  12   0  24   0   0   0   0   6  96  87  89
C |   0  24  24  24   0   6   0   0   0   2   6  24  24  24   8   0  24   0   0   0   0  21   0   0   2
G |  67  24  24  24  96  17  96   0   0   2   8  24  24  24  15  93  24   0  96   0  96  11   0   6   3
T |   0  24  24  24   0  67   0  96   0   2   6  24  24  24  61   3  24  96   0  96   0  58   0   3   2

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updated Fri Jun 26 04:21:14 2026