6xg8_AB : 3D-footprint complex

structure name	ISCTH4 TRANSPOSASE, PRE-CLEAVED COMPLEX, PCC
reference	Kosek et al. 'Embo 40 e105666 2021
experiment	X-ray (resolution=3.50, R-factor=?)
structural superfamily	Ribonuclease H-like;
reference complex	6xg8_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6xg8_A interface=54,64,66,69,86,88,100,102,121,122,137,138,139,142,357,358,360, iitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgyekYesteeaksnYrNgyTsktlkssvgqveidipRdRnaefepkivprYkRdiseienkiiamyargmsTReineqiqeiygfevSAEmvSkitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefardlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntieslnssyrrinksrTVfPgdqsllksiylatvkitskwtmryknwglilgqlqimfegr > 6xg8_B interface=216,219,224,225,228,293, kriitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgdiseienkiiamyargmstreineqiqeiygfevsaemvskitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntLkyVsdkdRKefArdlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntiEslnssyrrinksrtvfpgdqsllksiylatvkitskwtmryknwglilgqlqimfegr
interface signature	YYNTRRYRTRSAESTVP/LVRKAE

Estimated binding specificities ?

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# IC=18.914 IC/col=0.757 n_of_columns=25

specificity:

A |  28  24  24  24   0   6   0   0  96  89  78  24  24  24  10   0  24   0   0   0   0   8  96  88  90
C |   1  24  24  24   0   6   0   0   0   3   6  24  24  24   8   0  24   0   0   0   0  19   0   0   2
G |  67  24  24  24  96  17  96   0   0   2   6  24  24  24  15  94  24   0  96   0  96   8   0   6   2
T |   0  24  24  24   0  67   0  96   0   2   6  24  24  24  63   2  24  96   0  96   0  61   0   2   2

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updated Tue Jan 6 17:47:22 2026