6xgw_AB : 3D-footprint complex

structure name	ISCTH4 TRANSPOSASE, PRE-REACTION COMPLEX, PRC
reference	Kosek et al. 'Embo 40 e105666 2021
experiment	X-ray (resolution=3.50, R-factor=?)
structural superfamily	Ribonuclease H-like;
reference complex	6xg8_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6xgw_A interface=54,64,66,69,86,88,100,102,121,122,137,138,139,142,357,358,360, iitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgyekYesteeaksnYrNgyTsktlkssvgqveidipRdRnaefepkivprYkRdiseienkiiamyargmsTReineqiqeiygfevSAEmvSkitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefardlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntieslnssyrrinksrTVfPgdqsllksiylatvkitskwtmryknwglilgqlqimfegr > 6xgw_B interface=234,237,238, kriitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgprykrdiseienkiiamyargmstreineqiqeiygfevsaemvskitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefaRdlKRiytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntieslnssyrrinksrtvfpgdqsllksiylatvkitskwtmryknwglilgqlqimfegr
interface signature	YYNTRRYRTRSAESTVP/RKR

Estimated binding specificities ?

readout + contact

# IC=21.279 IC/col=0.734 n_of_columns=29

specificity:

A |   4   0   0  11  96   0  96  24  96  74  74  90  24  24  24  24   0   0  96   0  96   9  24  24  24  24   7  71  96
C |   1   0   0  11   0  96   0  24   0  10   7   1  24  24  24  24   0   0   0  96   0  71  24  24  24  24  72   7   0
G |  90   0   0   9   0   0   0  24   0   7   8   1  24  24  24  24   0   0   0   0   0   7  24  24  24  24   7   9   0
T |   1  96  96  65   0   0   0  24   0   5   7   4  24  24  24  24  96  96   0   0   0   9  24  24  24  24  10   9   0

scan!

home
updated Wed Sep 11 00:32:14 2024