6xnz_AC : 3D-footprint complex

structure name	STRUCTURE OF RAG1 (R848M/E649V)-RAG2-DNA TARGET CAPTURE COMPLEX
experiment	NMR
structural superfamily	Galactose oxidase, central domain;
reference complex	6xnz_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6xnz_A interface=142,146,204,250,263,337,348,389,390,504, gsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescDgmgDvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnsvlcckplclmladEsdhetltailspliaereamksseltlemggiprtfkfifrgtgyDeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalHcdignaaefyKifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpiMMmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnEsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna > 6xnz_C interface=142,250,263,337,389,390,504, gsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescDgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnsvlcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgyDeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalHcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpiMMmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnEsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahn
interface signature	DDEDSHKMME/DDSHMME

Estimated binding specificities ?

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# IC=7.995 IC/col=1.142 n_of_columns=7

specificity:

A |   0   0   0  24   0   0   0
C |  96  96   0  24  96   0   0
G |   0   0  96  24   0  96  96
T |   0   0   0  24   0   0   0

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updated Sun Dec 15 00:59:11 2024