6za3_AB : 3D-footprint complex

structure name	STRUCTURE OF THE TRANSCRIPTIONAL REPRESSOR ATU1419 (VANR) FROM AGROBACTERIUM FABRUM IN COMPLEX A PALINDROMIC DNA (C2221 SPACE GROUP)
reference	Vigouroux et al. 'Nucleic 49 529 2021
source	AGROBACTERIUM FABRUM STR. C58
experiment	X-ray (resolution=2.05, R-factor=?)
structural superfamily	GntR ligand-binding domain-like;"Winged helix" DNA-binding domain;
reference complex	6za3_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6za3_A interface=29,38,39,40,43, athggravielrekilsgelpggmrlfeVstaelldiSRTpvRealsrlteegllnrlpgggfvvrrfgfadvvdaievrgvmegtaarlaaergvskvaleeidatvqqldlcfgdrvddvdfdgyaalnrifhhqlaalcgsemirreverasslpfaspsaflpdkanigafrrslrgaqeqhkaivaaivaregaraeavarehsrtartnleymireapeliaqvpglalisd > 6za3_B interface=30,39,40,41,44, aathggravielrekilsgelpggmrlfeVstaelldiSRTpvRealsrlteegllnrlpgggfvvrrfgfadvvdaievrgvmegtaarlaaergvskvaleeidatvqqldlcfgdrvddvdfdgyaalnrifhhqlaalcgsemirreverasslpfaspsaflpdkanigafrrslrgaqeqhkaivaaivaregaraeavarehsrtartnleymireapeliaqvpglalisd
interface signature	VSRTR/VSRTR

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# IC=8.121 IC/col=1.015 n_of_columns=8

A |   0   0  10  74   0  64   0  96
C |   0   0  10  12   0  10  96   0
G |   0  96  10   0   0  12   0   0
T |  96   0  66  10  96  10   0   0

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updated Sun Dec 15 01:27:17 2024