6za3_AB : 3D-footprint complex

structure name	STRUCTURE OF THE TRANSCRIPTIONAL REPRESSOR ATU1419 (VANR) FROM AGROBACTERIUM FABRUM IN COMPLEX A PALINDROMIC DNA (C2221 SPACE GROUP)
reference	Vigouroux et al. 'Nucleic 49 529 2021
source	AGROBACTERIUM FABRUM STR. C58
experiment	X-ray (resolution=2.05, R-factor=?)
structural superfamily	GntR ligand-binding domain-like;"Winged helix" DNA-binding domain;
reference complex	6za3_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6za3_A interface=29,38,39,40,43, athggravielrekilsgelpggmrlfeVstaelldiSRTpvRealsrlteegllnrlpgggfvvrrfgfadvvdaievrgvmegtaarlaaergvskvaleeidatvqqldlcfgdrvddvdfdgyaalnrifhhqlaalcgsemirreverasslpfaspsaflpdkanigafrrslrgaqeqhkaivaaivaregaraeavarehsrtartnleymireapeliaqvpglalisd > 6za3_B interface=30,39,40,41,44, aathggravielrekilsgelpggmrlfeVstaelldiSRTpvRealsrlteegllnrlpgggfvvrrfgfadvvdaievrgvmegtaarlaaergvskvaleeidatvqqldlcfgdrvddvdfdgyaalnrifhhqlaalcgsemirreverasslpfaspsaflpdkanigafrrslrgaqeqhkaivaaivaregaraeavarehsrtartnleymireapeliaqvpglalisd
interface signature	VSRTR/VSRTR

readout + contact

# IC=8.472 IC/col=1.059 n_of_columns=8

A |   0   0  13  96   0  54   0  96
C |   0   0  13   0   0  13  96   0
G |   0  96  13   0   0  16   0   0
T |  96   0  57   0  96  13   0   0

home
updated Wed Sep 11 01:28:40 2024