6za3_B : 3D-footprint complex

structure name	STRUCTURE OF THE TRANSCRIPTIONAL REPRESSOR ATU1419 (VANR) FROM AGROBACTERIUM FABRUM IN COMPLEX A PALINDROMIC DNA (C2221 SPACE GROUP) (TRANSCRIPTIONAL REGULATOR, GNTR FAMILY)
reference	Vigouroux et al. 'Nucleic 49 529 2021
source	AGROBACTERIUM FABRUM STR. C58
experiment	X-ray (resolution=2.05, R-factor=0.194)
structural superfamily	GntR ligand-binding domain-like;"Winged helix" DNA-binding domain;
sequence family	FCD domain; Bacterial regulatory proteins, gntR family;
multimeric complexes	6za3_AB
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6za3_B interface=30,39,40,41,44, aathggravielrekilsgelpggmrlfeVstaelldiSRTpvRealsrlteegllnrlpgggfvvrrfgfadvvdaievrgvmegtaarlaaergvskvaleeidatvqqldlcfgdrvddvdfdgyaalnrifhhqlaalcgsemirreverasslpfaspsaflpdkanigafrrslrgaqeqhkaivaaivaregaraeavarehsrtartnleymireapeliaqvpglalisd
interface signature	VSRTR

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# IC=5.807 IC/col=0.968 n_of_columns=6

A |   0   0   0  57   0  54
C |   0   0   0  13   0  16
G |   0  96   0  13   0  13
T |  96   0  96  13  96  13

matrix format

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updated Sat Sep 14 00:59:31 2024