6zix_AB : 3D-footprint complex

structure name	STRUCTURE OF RCSB FROM SALMONELLA ENTERICA SEROVAR TYPHIMURIUM BOUND TO PROMOTER P1FLHDC IN THE PRESENCE OF PHOSPHOMIMETIC BEF3-
reference	Marina et al. 'Nucleic 49 2357 2021
experiment	X-ray (resolution=3.40, R-factor=?)
structural superfamily	CheY-like;C-terminal effector domain of the bipartite response regulators;
reference complex	5w43_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6zix_A interface=173,174,175,177,178,179, nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgesvsrllekisaggygdkrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylssv > 6zix_B interface=175,176,177,179,180,181, nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkftpesvsrllekisagdkrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylssvt
interface signature	IKTSSQ/IKTSSQ

Estimated binding specificities ?

readout + contact

# IC=11.235 IC/col=0.802 n_of_columns=14

specificity:

A |   3  84   3   3  96  87  24  24  24   3   3   0   0  84
C |   6   3   3   3   0   3  24  24  24   3  87   0   0   3
G |   3   3  87  87   0   3  24  24  24   6   3   0   0   3
T |  84   6   3   3   0   3  24  24  24  84   3  96  96   6

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updated Wed Sep 11 01:41:17 2024