6zj2_AB : 3D-footprint complex

structure name	STRUCTURE OF RCSB FROM SALMONELLA ENTERICA SEROVAR TYPHIMURIUM BOUND TO PROMOTER RPRA IN THE PRESENCE OF PHOSPHOMIMETIC BEF3-
reference	Marina et al. 'Nucleic 49 2357 2021
experiment	X-ray (resolution=3.38, R-factor=?)
structural superfamily	CheY-like;C-terminal effector domain of the bipartite response regulators;
reference complex	5w43_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6zj2_A interface=174,175,177,178, nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkpesvsrllekisaggygdkrlspkesevlrlfaegflvteiakklnrsiKTiSSqkksammklgvendiallnylssv > 6zj2_B interface=178,179,180,182,183, nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkftpesvsrllekisaggygdkrlspkesevlrlfaegflvteiakklnrsIKTiSSqkksammklgvendiallnylssvt
interface signature	KTSS/IKTSS

Estimated binding specificities ?

readout + contact

# IC=6.969 IC/col=0.581 n_of_columns=12

specificity:

A |  80   0  96  24  24  24  24  16   5   0  10  96
C |   5   0   0  24  24  24  24  10  80  16  16   0
G |   5  96   0  24  24  24  24  12   6   0  60   0
T |   6   0   0  24  24  24  24  58   5  80  10   0

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updated Thu Jul 31 07:23:59 2025