interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI XZ440 (COMPOUND 5J)
(INTEGRASE)
referenceCherepanov et al. 'Acs 7 1469 2021
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=2.62, R-factor=0.204)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERP

Estimated binding specificities ?

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# IC=2.059 IC/col=0.515 n_of_columns=4 specificity:   
A |   3   8   9  49
C |   3   7  67  17
G |  85   7   9  15
T |   5  74  11  15
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updated Fri Sep 13 03:33:02 2024