| structure name | ATOMIC STRUCTURE OF THE POXVIRUS TRANSCRIPTION PRE-INITIATION COMPLEX IN THE INITIALLY MELTED STATE (ATP-DEPENDENT HELICASE VETFS) |
| source | VACCINIA VIRUS GLV-1H68 |
| experiment | NMR |
| structural superfamily | P-loop containing nucleoside triphosphate hydrolases; |
| sequence family | Helicase conserved Cterminal domain; Type III restriction enzyme, res subunit; |
| multimeric complexes | 7amv_BKW |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format--------------KG----FC--KG--------SGKT------------------------------ +-------------------7amv_W ! ----------------------------------QT-------------------------------- ! +6ne3_W ! +--1 ----------------------------------HC--RC---------------------------- ! +-3 +7egp_A +-10 ! ! ----------------------NT----------SG-------------------------------- ! ! +-----5 +---7enn_K ! ! ! ! ------------------NT------------------------------------------------ ! ! +-6 +----6vz4_K ! ! ! ! ----------------NC-------------------------------------------------- ! +-------7 +----------6uxw_A +--13 ! --------------------------------------RG---------------------------- ! ! ! +---6ftx_W ! ! +-------4 ----------------------NA-------------------------------------------- L ! ! +---7tn2_W ! ! ----QG----RT-------------------------------------------------------- +-15 ! +---------------------6gen_M ! ! +-12 ------RC------------------------------------------------------------ ! ! +---------------------1z63_A ! ! --------------------------------------IC--KC------------------------ ! ! +-------------7aud_E ! ! +-----8 ----DC--HA---------------------------------------------------------- +-17 +-----11 +-------------6znp_A ! ! ! ------------TA--------------HA-------------------------------------- L ! ! +-------------------3kqh_B ! ! --------------------------------------------SG---------------------- L ! ! +-----------------------2v1u_A ! ! +--14 ----------------------------------------------RG-------------------- L +-18 +-16 +-----------------------6lui_A ! ! ! --------------------------CGNCSGKG------DGRG------------------------ L ! ! +---------------------------6crm_A ! ! ----------------------------------------------------NC--ITNA--RGRG-- L ! ! +----------------6fqq_E +-19 +------------9 ----------------------------------------------------NC--ICNA----RG-- L ! ! ! +-6fqp_B ! ! +--------------2 ----------------------------------------------------IT--QCNA--ACRG-- L -20 ! +-6a8r_A ! ! --------------------------------------------------KGSA--QA---------- L ! +-----------------------------6j5b_C ! HTRT---------------------------------------------------------------- L +-----------------------------1k61_B |
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updated Wed Dec 18 08:05:24 2024