interface graph thumbnail
legend  pdf

structure nameDTXR-LIKE IRON-DEPENDENT REGULATOR IDER COMPLEXED WITH IRON AND ITS CONSENSUS DNA-BINDING SEQUENCE
referenceMarcos-Torres et al.
experimentX-ray (resolution=2.18, R-factor=?)
structural superfamilyIron-dependent repressor protein, dimerization domain;C-terminal domain of transcriptional repressors;"Winged helix" DNA-binding domain;
reference complex7b24_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSPTSQR/SPTSQR/SPTSQR/SPTSQR

Estimated binding specificities ?

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# IC=13.517 IC/col=0.901 n_of_columns=15 specificity:   
A |  96   3   0   3  24  77   3   0   3   3  24  84   0   3   0
C |   0   3   0   3  24   7   0   0  84   3  24   3  96  87   0
G |   0  84  96   3  24   9  93  84   3   6  24   3   0   3   0
T |   0   6   0  87  24   3   0  12   6  84  24   6   0   3  96
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updated Wed Sep 11 02:39:05 2024