7b25_ABCD : 3D-footprint complex

structure name	DTXR-LIKE IRON-DEPENDENT REGULATOR IDER (Q43A VARIANT) COMPLEXED WITH COBALT AND ITS CONSENSUS DNA-BINDING SEQUENCE
reference	Marcos-Torres et al.
experiment	X-ray (resolution=2.34, R-factor=?)
structural superfamily	Iron-dependent repressor protein, dimerization domain;C-terminal domain of transcriptional repressors;"Winged helix" DNA-binding domain;
reference complex	7b24_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7b25_A interface=35,37,38,40,45, dlidttemylrtiydleeegvvplrariaerleqSgPTvSatvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgv > 7b25_B interface=35,37,38,40,45,58, dlidttemylrtiydleeegvvplrariaerleqSgPTvSatvaRmerdglltvaedRhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgvsvepvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrvk > 7b25_C interface=35,37,38,40,45, dlidttemylrtiydleeegvvplrariaerleqSgPTvSatvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgvsvepvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrvk > 7b25_D interface=35,37,38,40,45, dlidttemylrtiydleeegvvplrariaerleqSgPTvSatvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgv
interface signature	SPTSR/SPTSRR/SPTSR/SPTSR

Estimated binding specificities ?

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# IC=20.712 IC/col=1.090 n_of_columns=19

specificity:

A |   1   8  96   0   2   0  17  96   1   5   0   0  63  96   0   1   0  63  85
C |   1   0   0   0   0   0   7   0   2   4  96   0   5   0  94  95   0  17   1
G |   0   0   0  96  94   0   9   0  92  82   0   0  11   0   0   0   0   9   3
T |  94  88   0   0   0  96  63   0   1   5   0  96  17   0   2   0  96   7   7

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updated Fri Jun 26 06:55:46 2026