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legend  pdf

structure nameDTXR-LIKE IRON-DEPENDENT REGULATOR IDER (Q43A VARIANT) COMPLEXED WITH COBALT AND ITS CONSENSUS DNA-BINDING SEQUENCE
referenceMarcos-Torres et al.
experimentX-ray (resolution=2.34, R-factor=?)
structural superfamilyIron-dependent repressor protein, dimerization domain;C-terminal domain of transcriptional repressors;"Winged helix" DNA-binding domain;
reference complex7b24_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSPTSR/SPTSRR/SPTSR/SPTSR

Estimated binding specificities ?

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# IC=20.592 IC/col=1.084 n_of_columns=19 specificity:   
A |   0   1  96   0   5   0  13  96   0   1   0   0  63  96   1   1   0  63  90
C |   1   3   0   0   0   0   7   0   1   9  96   0  11   0  94  94   0  13   1
G |   5   4   0  96  91   0   9   0  94  80   0   0   9   0   0   1   0  13   4
T |  90  88   0   0   0  96  67   0   1   6   0  96  13   0   1   0  96   7   1
scan!

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updated Sun Dec 15 02:45:36 2024