7bhy_AB : 3D-footprint complex

structure name	DNA-BINDING DOMAIN OF DEOR IN COMPLEX WITH THE DNA OPERATOR
reference	Novakova et al. 'Acta 77 1411 2021
source	Bacillus subtilis subsp. subtilis str. 168
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Sigma3 and sigma4 domains of RNA polymerase sigma factors;
reference complex	7bhy_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7bhy_A interface=35,36,37,40,41, snaasekqqlsieaarlyyqsdysqqqiaeqlniSRPtvSRllqyakekgyvqirvm > 7bhy_B interface=21,31,32,33,34,36,37, sekqqlsieaarlyyqsdysQqqiaeqlniSRPTvSRllqyakekgyvqirvm
interface signature	SRPSR/QSRPTSR

Estimated binding specificities ?

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# IC=8.561 IC/col=0.659 n_of_columns=13

specificity:

A |   5   0  79  67   0  96  24  24  11  24   7  24  96
C |   5   0   5  13  96   0  24  24   1  24  22  24   0
G |   7  96   5   5   0   0  24  24  84  24   5  24   0
T |  79   0   7  11   0   0  24  24   0  24  62  24   0

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updated Tue Jan 6 20:43:59 2026