structure name | DNA-BINDING DOMAIN OF DEOR IN COMPLEX WITH THE DNA OPERATOR (Deoxyribonucleoside regulator) |
reference | Novakova et al. 'Acta 77 1411 2021 |
source | Bacillus subtilis subsp. subtilis str. 168 |
experiment | X-ray (resolution=2.30, R-factor=0.209) |
structural superfamily | Sigma3 and sigma4 domains of RNA polymerase sigma factors; |
multimeric complexes | 7bhy_AB |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | SRPSR |
Estimated binding specificities ?
contact |
A | 0 0 9 9 0 69 C | 0 0 9 11 96 9 G | 0 96 11 9 0 9 T | 96 0 67 67 0 9scan! |
Dendrogram of similar interfaces ?
matrix formatRT--LANTHGTTETYTRG-------- L +-----------------------------1f4k_B +-1 --TT------KATTQTTGLTRT--KA L +-2 +-----------------------------2p7c_B ! ! ------DCLT--AGTTRG--RG---- L --3 +-----------------------------5h3r_A ! ----------------------YCFA +-----------------------------6pe2_B |
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updated Sat Sep 14 01:57:33 2024