7bzg_AB : 3D-footprint complex

structure name	STRUCTURE OF BACILLUS SUBTILIS HXLR, WILD TYPE IN COMPLEX WITH FORMALDEHYDE AND DNA
reference	Chen et al. 'Nat 12 581 2021
source	Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168)
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7bzg_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7bzg_A interface=39,40,51,52,53,55,77, srmddkrfncekeltlaviggkwkmlilwhlgkegtkrFNelktlipditQKIlVnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi > 7bzg_B interface=39,40,50,51,52,53,55,77, srmddkrfncekeltlaviggkwkmlilwhlgkegtkrFNelktlipdiTQKIlVnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi
interface signature	FNQKIVP/FNTQKIVP

Estimated binding specificities ?

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# IC=12.710 IC/col=0.636 n_of_columns=20

specificity:

A |   4  52  24  24  56   2   0   0  24  24  24  24  24   0  93   0  92   3   2   1
C |  85  10  24  24  12   8  96  96  24  24  24  24  24   0   0   0   2  93  15   2
G |   4  17  24  24  15   4   0   0  24  24  24  24  24  96   2   0   0   0   7  91
T |   3  17  24  24  13  82   0   0  24  24  24  24  24   0   1  96   2   0  72   2

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updated Sun Dec 17 00:35:19 2023