7bzg_EF : 3D-footprint complex

structure name	STRUCTURE OF BACILLUS SUBTILIS HXLR, WILD TYPE IN COMPLEX WITH FORMALDEHYDE AND DNA
reference	Chen et al. 'Nat 12 581 2021
source	Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168)
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7bzg_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7bzg_E interface=39,40,51,52,53,55,77, srmddkrfncekeltlaviggkwkmlilwhlgkegtkrFNelktlipditQKIlVnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi > 7bzg_F interface=39,40,50,51,52,53,77, srmddkrfncekeltlaviggkwkmlilwhlgkegtkrFNelktlipdiTQKIlvnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi
interface signature	FNQKIVP/FNTQKIP

Estimated binding specificities ?

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# IC=9.586 IC/col=0.533 n_of_columns=18

specificity:

A |   0  24  41   0   0  24  24  24  24  24  24   0  94   4  76  28  24   0
C |  12  24  24   0  93  24  24  24  24  24  24   0   0  10   0  68  24   0
G |  74  24  26   0   3  24  24  24  24  24  24  96   2   0  10   0  24  96
T |  10  24   5  96   0  24  24  24  24  24  24   0   0  82  10   0  24   0

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updated Thu Jul 31 08:49:41 2025