7bzg_EF : 3D-footprint complex

structure name	STRUCTURE OF BACILLUS SUBTILIS HXLR, WILD TYPE IN COMPLEX WITH FORMALDEHYDE AND DNA
reference	Chen et al. 'Nat 12 581 2021
source	Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168)
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7bzg_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7bzg_E interface=39,40,51,52,53,55,77, srmddkrfncekeltlaviggkwkmlilwhlgkegtkrFNelktlipditQKIlVnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi > 7bzg_F interface=39,40,50,51,52,53,77, srmddkrfncekeltlaviggkwkmlilwhlgkegtkrFNelktlipdiTQKIlvnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi
interface signature	FNQKIVP/FNTQKIP

Estimated binding specificities ?

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# IC=9.435 IC/col=0.524 n_of_columns=18

specificity:

A |   0  24   1   0  78   3   0  24  24  24  24  24  24   3  96   8  24   6
C |  90  24   0  16   6   1  96  24  24  24  24  24  24   3   0  13  24  86
G |   3  24  82   3   6   3   0  24  24  24  24  24  24  87   0   9  24   3
T |   3  24  13  77   6  89   0  24  24  24  24  24  24   3   0  66  24   1

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updated Sun Dec 17 00:35:31 2023