7e1b_EFG : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF VBRR-DNA COMPLEX
reference	Zhang et al. 'to ? ? ?
source	VIBRIO PARAHAEMOLYTICUS
experiment	X-ray (resolution=4.59, R-factor=?)
structural superfamily	CheY-like;C-terminal effector domain of the bipartite response regulators;
reference complex	7e1b_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7e1b_E interface=179,183,186, mkqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlrnadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgynttRtvdThvLqlrqklpgleietlrgvgykmka > 7e1b_F interface=178,179,182,183,185,186,200, kqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlranadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgyntRTvdTHvLQlrqklpgleietlRgvgykmka > 7e1b_G interface=179,183,186,201, mkqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlrnadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgynttRtvdThvLqlrqklpgleietlRgvgykmka
interface signature	RTL/RTTHLQR/RTLR

Estimated binding specificities ?

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# IC=11.545 IC/col=0.608 n_of_columns=19

specificity:

A |  72  24  24   2   0   0  24  90  64  24  24  24   0   4  96  24  70  92   2
C |  10  24  24  10   2   0  24   0  15  24  24  24   0  12   0  24   4   0   2
G |  12  24  24   4   1   0  24   4   7  24  24  24   0   0   0  24  10   2   2
T |   2  24  24  80  93  96  24   2  10  24  24  24  96  80   0  24  12   2  90

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updated Fri Jun 26 08:43:25 2026