7e1b_EFG : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF VBRR-DNA COMPLEX
reference	Zhang et al. 'to ? ? ?
source	VIBRIO PARAHAEMOLYTICUS
experiment	X-ray (resolution=4.59, R-factor=?)
structural superfamily	CheY-like;C-terminal effector domain of the bipartite response regulators;
reference complex	7e1b_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7e1b_E interface=179,183,186, mkqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlrnadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgynttRtvdThvLqlrqklpgleietlrgvgykmka > 7e1b_F interface=178,179,182,183,185,186,200, kqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlranadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgyntRTvdTHvLQlrqklpgleietlRgvgykmka > 7e1b_G interface=179,183,186,201, mkqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlrnadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgynttRtvdThvLqlrqklpgleietlRgvgykmka
interface signature	RTL/RTTHLQR/RTLR

Estimated binding specificities ?

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# IC=11.641 IC/col=0.613 n_of_columns=19

specificity:

A |  69  24  24   3   3   0  24  87  69  24  24  24   0   0  96  24  69  93   3
C |  12  24  24   3   0   0  24   3  12  24  24  24   0   9   0  24   6   0   3
G |  12  24  24   3   0   0  24   3   9  24  24  24   0   3   0  24   9   0   3
T |   3  24  24  87  93  96  24   3   6  24  24  24  96  84   0  24  12   3  87

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updated Wed Sep 11 04:08:51 2024