| structure name | CRYSTAL STRUCTURE OF VBRR-DNA COMPLEX (DNA-BINDING RESPONSE REGULATOR) |
| reference | Zhang et al. 'to ? ? ? |
| source | VIBRIO PARAHAEMOLYTICUS |
| experiment | X-ray (resolution=4.59, R-factor=0.277) |
| structural superfamily | CheY-like;C-terminal effector domain of the bipartite response regulators; |
| sequence family | Transcriptional regulatory protein, C te; Response regulator receiver domain; |
| multimeric complexes | 7e1b_ABCD 7e1b_EFG |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RTTHL |
Estimated binding specificities ?
| contact |  |
A | 0 0 5 79 13 24 5 C | 0 0 81 5 11 24 11 G | 0 0 5 5 16 24 69 T | 96 96 5 7 56 24 11scan! |
Dendrogram of similar interfaces ?
matrix format------------------RCTT----TTHTLA-------------- L +---------------7e1b_B +------5 ------------------RTTT--DAVT--RGRG------RA---- L ! +---------------1gxp_A +-6 ------------------DTSC----SGKG----------RT---- L ! ! +-----------5x5l_H ! +----------3 ----------------------------RC--YG----KT------ +--7 +-----------2acj_B ! ! ------------------RG----DTVT--STRG------RC---- L ! ! +-------------4nhj_A ! +---------4 --------------------------------YGRG---------- +-8 ! +-4wcg_A ! ! +-----------1 ------------ETNTSCRGHC----RT------------QA---- ! ! +-5d4s_B ! ! ----------TT--------KATT--QTTG--LTRTKA----FTYT L +-9 ! +----------2p7c_B ! ! +---------------2 ----------------SGRGPT----SGRG---------------- L ! ! +----------7bhy_A +-10 ! --------------------------------YG------------ ! ! +---------------------------3eyi_B +-11 ! ----------------------------RG--YG------------ ! ! +----------------------------1qbj_C +-12 ! --------------------------------YG------------ ! ! +----------------------------1sfu_A -13 ! --IT----TA------------------------------------ ! +----------------------------4p0p_A ! ET--NGSG-------------------------------------- +----------------------------7aud_E |
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updated Wed Dec 18 08:39:50 2024