7el3_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HPAR-DNA COMPLEX FROM ACINETOBACTER BAUMANNII
reference	Permsirivisarn et al. 'Febs 289 3217 2022
source	Acinetobacter baumannii
experiment	X-ray (resolution=1.70, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7el3_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7el3_A interface=50,59,60,61,62,64,69,86, pirpsltlalleareaimshfrpalnevglteqqwriirilyqyeelesNqlaelaciLKPSlTgilnRmveqkliqkrkdyddqRislisltesglecfktqavkmeasyqkiqeqygeekmkqllellkdlskikl > 7el3_B interface=47,56,57,58,59,61,66,83, psltlalleareaimshfrpalnevglteqqwriirilyqyeelesNqlaelaciLKPSlTgilnRmveqkliqkrkdyddqRislisltesglecfktqavkmeasyqkiqeqygeekmkqllellkdlskikl
interface signature	NLKPSTRR/NLKPSTRR

Estimated binding specificities ?

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# IC=14.259 IC/col=0.713 n_of_columns=20

specificity:

A |  84   3  24   3   0   2  73  73  24  64  24  24  24   0  93  96   0  24  89  92
C |   2   2  24   2   0   2   4   2  24  11  24  24  24   3   1   0  96  24   3   2
G |   4   0  24  91   0   2  11  10  24  11  24  24  24   0   2   0   0  24   2   2
T |   6  91  24   0  96  90   8  11  24  10  24  24  24  93   0   0   0  24   2   0

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updated Sun Dec 15 05:26:37 2024