7el3_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HPAR-DNA COMPLEX FROM ACINETOBACTER BAUMANNII
reference	Permsirivisarn et al. 'Febs 289 3217 2022
source	Acinetobacter baumannii
experiment	X-ray (resolution=1.70, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7el3_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7el3_A interface=50,59,60,61,62,64,69,86, pirpsltlalleareaimshfrpalnevglteqqwriirilyqyeelesNqlaelaciLKPSlTgilnRmveqkliqkrkdyddqRislisltesglecfktqavkmeasyqkiqeqygeekmkqllellkdlskikl > 7el3_B interface=47,56,57,58,59,61,66,83, psltlalleareaimshfrpalnevglteqqwriirilyqyeelesNqlaelaciLKPSlTgilnRmveqkliqkrkdyddqRislisltesglecfktqavkmeasyqkiqeqygeekmkqllellkdlskikl
interface signature	NLKPSTRR/NLKPSTRR

Estimated binding specificities ?

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# IC=14.499 IC/col=0.725 n_of_columns=20

specificity:

A |  90   0  24   2   0   1  57  65  24  55  24  24  24   1  90  96   0  24  96  96
C |   1   0  24   0   0   4  15   1  24  13  24  24  24   1   4   0  96  24   0   0
G |   1   0  24  94   0   1  11  17  24  11  24  24  24   4   1   0   0  24   0   0
T |   4  96  24   0  96  90  13  13  24  17  24  24  24  90   1   0   0  24   0   0

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updated Wed Sep 11 05:08:55 2024