7fj2_AB : 3D-footprint complex

structure name	STRUCTURE OF FOXM1 HOMODIMER BOUND TO A PALINDROMIC DNA SITE
reference	Zhang et al. J.Mol.Biol. 434 167426 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=3.10, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	3g73_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7fj2_A interface=51,52,54,55,58,59, vserppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHnlSLhdmfvretsangkvsfwtih > 7fj2_B interface=48,49,51,52,53,55,56, rppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHNlSLhdmfvretsangkvsfwtih
interface signature	NSRHSL/NSRHNSL

Estimated binding specificities ?

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# IC=12.100 IC/col=1.008 n_of_columns=12

specificity:

A |   0  80  96  78   3  85   3   0   3   0   5  96
C |  10   3   0  10  85   3   3   0   3   0   3   0
G |   1  10   0   5   3   3   3  92   5   0   3   0
T |  85   3   0   3   5   5  87   4  85  96  85   0

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updated Wed Sep 11 05:49:23 2024