| structure name | STRUCTURE OF THE FOXM1 DNA BINDING (Forkhead box protein M1) |
| reference | Littler et al. 'Nucleic ? ? 2010 |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.21, R-factor=0.206) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Fork head domain; |
| multimeric complexes | 3g73_AB 7fj2_AB 7fj2_EF |
| redundant complexes |  7fj2_F
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | NSRHS |
Estimated binding specificities ?
| readout + contact |  |
A | 0 88 96 64 24 56 C | 0 0 0 16 64 16 G | 0 8 0 16 0 8 T | 96 0 0 0 8 16scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: FOXM1 | ||
| TAAACA | PubMed | 3g73_A(5.71e-11), 3g73_AB(2.21e-07) |
Dendrogram of similar interfaces ?
matrix format--------------NAST--RGHT--STLT------ L +------7cby_C +-----------1 --------------NAST--RTHT--ST-------- L +---2 +------3l2c_A ! ! ----------STRTSTHG--------------RA-- L +-3 +------------------3zpl_B ! ! RT--LANTHGTTETYTRG------------------ L +-4 +----------------------1f4k_B ! ! --TT------KATTQTTG----LTRT----KAFTYT L --5 +------------------------2p7c_B ! ------------KT--RGAT--RGNT---------- L +--------------------------8smh_F |
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updated Tue Dec 17 23:21:59 2024