7fj2_EF : 3D-footprint complex

structure name	STRUCTURE OF FOXM1 HOMODIMER BOUND TO A PALINDROMIC DNA SITE
reference	Zhang et al. J.Mol.Biol. 434 167426 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=3.10, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	3g73_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7fj2_E interface=51,52,54,55,58, vserppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHnlSlhdmfvretsangkvsfwtih > 7fj2_F interface=52,53,55,56,59,60, svserppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHnlSLhdmfvretsangkvsfwtih
interface signature	NSRHS/NSRHSL

Estimated binding specificities ?

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# IC=11.835 IC/col=0.986 n_of_columns=12

specificity:

A |   0  90  96  55  19  71   1   1  11   0   0  96
C |   0   1   0  15  75   5   4   0  13   0   0   0
G |   0   1   0  17   1  11   1  94  11   0   1   0
T |  96   4   0   9   1   9  90   1  61  96  95   0

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updated Wed Sep 11 05:49:32 2024