7fj2_EF : 3D-footprint complex

structure name	STRUCTURE OF FOXM1 HOMODIMER BOUND TO A PALINDROMIC DNA SITE
reference	Zhang et al. J.Mol.Biol. 434 167426 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=3.10, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	3g73_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7fj2_E interface=51,52,54,55,58, vserppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHnlSlhdmfvretsangkvsfwtih > 7fj2_F interface=52,53,55,56,59,60, svserppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHnlSLhdmfvretsangkvsfwtih
interface signature	NSRHS/NSRHSL

Estimated binding specificities ?

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# IC=12.031 IC/col=1.003 n_of_columns=12

specificity:

A |   0  93  96  55  20  69   3   0  15   0   0  96
C |   0   0   0  16  76   2   0   0  16   0   0   0
G |   0   0   0  16   0  16   7  96   9   0   0   0
T |  96   3   0   9   0   9  86   0  56  96  96   0

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updated Sun Dec 15 06:09:58 2024