7jm4_GH : 3D-footprint complex

structure name	IRF TRANSCRIPTION FACTOR
reference	Casarotto et al. 'Nucleic 49 2255 2021
source	Homo sapiens
experiment	X-ray (resolution=2.95, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7oot_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7jm4_G interface=75,78,79,83, ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelversqldisdpykvyrivp > 7jm4_H interface=39,78,79,83, ngklrqwlidqidsgkypglvweneeksifripwkhagKqdynreedaalfkawalfkgkfregidkpdpptwktrlRCalnKsndfeelversqldisdpykvyriv
interface signature	TRCK/KRCK

Estimated binding specificities ?

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# IC=11.032 IC/col=1.003 n_of_columns=11

specificity:

A |   6   0  82  82  82   0   0   6  82   0  91
C |   4   0   4   4   4  96  91   4   6   0   0
G |   4  96   6   6   6   0   5  82   4  96   1
T |  82   0   4   4   4   0   0   4   4   0   4

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updated Fri Jun 26 11:10:46 2026