7jn3_EF : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF ROUS SARCOMA VIRUS CLEAVED SYNAPTIC COMPLEX (CSC) WITH HIV-1 INTEGRASE STRAND TRANSFER INHIBITOR MK-2048
source	ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A)
experiment	NMR
structural superfamily	Ribonuclease H-like;DNA-binding domain of retroviral integrase;N-terminal Zn binding domain of HIV integrase;
reference complex	7jn3_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7jn3_E interface=51,76,151,154,157,158,161,203,244,246, plreakdlhtalhigpralskacnismqqarevvqtcphcnsapaleagvNprglgplqiwqtdftleprmaprsWlavtvdtassaivvtqhgrvtsvavqhhwataiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsQgqAmvERanRllkdkirvlaegdgfmkriptskqgellakamyalnhfergEntktpiqkhwrptvltegppvkirietgewekgwnvlvwgRgYaavknrdtdkviwvpsrkvkpdi > 7jn3_F interface= gplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwAtaiavlgrpkaiktdngscftsksTrewlarwgiahttgipgnsqgqamveranrllkdkirvlaegdgfmkriptskqgellakamyalnhfergentKtpIqkHWrpTvltegppvkirietgewekgwnvlvwgrgyaavknrdtdkvIwvpsrkvkpdi
interface signature	NWQAERRERY/ATKIHWTI

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# IC=5.807 IC/col=0.968 n_of_columns=6

A |  16   0   0   0   0  13
C |  13   0   0   0   0  13
G |  13  96   0   0  96  13
T |  54   0  96  96   0  57

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updated Fri Jun 26 11:10:56 2026