7jn3_EF : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF ROUS SARCOMA VIRUS CLEAVED SYNAPTIC COMPLEX (CSC) WITH HIV-1 INTEGRASE STRAND TRANSFER INHIBITOR MK-2048
source	ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A)
experiment	NMR
structural superfamily	Ribonuclease H-like;DNA-binding domain of retroviral integrase;N-terminal Zn binding domain of HIV integrase;
reference complex	7jn3_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7jn3_E interface=151,154,157,158,161,203,244,246, plreakdlhtalhigpralskacnismqqarevvqtcphcnsapaleagvnprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsQgqAmvERanRllkdkirvlaegdgfmkriptskqgellakamyalnhfergEntktpiqkhwrptvltegppvkirietgewekgwnvlvwgRgYaavknrdtdkviwvpsrkvkpdi > 7jn3_F interface= gplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdkirvlaegdgfmkriptskqgellakamyalnhfergentKtpIqkHWrpTvltegppvkirietgewekgwnvlvwgrgyaavknrdtdkvIwvpsrkvkpdi
interface signature	QAERRERY/KIHWTI

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# IC=4.732 IC/col=0.946 n_of_columns=5

A |  56   0  96  78   1
C |  13  96   0   6  92
G |  14   0   0   6   1
T |  13   0   0   6   2

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updated Wed Sep 11 06:12:12 2024