interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF HUMAN TRANSCRIPTION FACTOR ERF IN THE OXIDIZED FORM, IN COMPLEX WITH DOUBLE-STRANDED DNA ACCGGAAGTG
(ETS domain-containing transcription factor ERF)
referenceTsodikov et al. Biochemistry ? ? 2020
sourceHomo sapiens
experimentX-ray (resolution=4.51, R-factor=0.226)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyEtsdomain;
reference complex7jsa_J
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureDKRRY

Estimated binding specificities ?

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# IC=3.287 IC/col=0.657 n_of_columns=5 specificity:   
A |  10   0   7  78  48
C |  63   0   4   6  16
G |  13  96  81   6  16
T |  10   0   4   6  16
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updated Tue Dec 17 09:21:51 2024