7kui_EF : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF ROUS SARCOMA VIRUS CLEAVED SYNAPTIC COMPLEX (CSC) WITH HIV-1 INTEGRASE STRAND TRANSFER INHIBITOR MK-2048. CIC REGION OF A CLUSTER IDENTIFIED BY 3-DIMENSIONAL VARIABILITY ANALYSIS IN CRYOSPARC.
source	ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A)
experiment	NMR
structural superfamily	Ribonuclease H-like;DNA-binding domain of retroviral integrase;N-terminal Zn binding domain of HIV integrase;
reference complex	7jn3_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7kui_E interface=51,151,154,158,161,203,244, plreakdlhtalhigpralskacnismqqarevvqtcphcnsapaleagvNprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsQgqAmveRanRllkdkirvlaegdgfmkriptskqgellakamyalnhfergEntktpiqkhwrptvltegppvkirietgewekgwnvlvwgRgyaavknrdtdkviwvpsrkvkpdi > 7kui_F interface= gplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwAtaiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdkirvlaegdgfmkriptskqgellakamyalnhfergentKtpIqkhWrpTvltegppvkirietgewekgwnvlvwgrgyaavknrdtdkvIwvpsrkvkpdi
interface signature	NQARRER/AKIWTI

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# IC=4.046 IC/col=0.674 n_of_columns=6

A |  19   1   7   0   6  14
C |  19   1   8   0   6  14
G |  20  93   7   0  78  14
T |  38   1  74  96   6  54

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updated Fri Jun 26 12:23:29 2026