7kui_EF : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF ROUS SARCOMA VIRUS CLEAVED SYNAPTIC COMPLEX (CSC) WITH HIV-1 INTEGRASE STRAND TRANSFER INHIBITOR MK-2048. CIC REGION OF A CLUSTER IDENTIFIED BY 3-DIMENSIONAL VARIABILITY ANALYSIS IN CRYOSPARC.
source	ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A)
experiment	NMR
structural superfamily	Ribonuclease H-like;DNA-binding domain of retroviral integrase;N-terminal Zn binding domain of HIV integrase;
reference complex	7jn3_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7kui_E interface=51,151,154,158,161,203,244, plreakdlhtalhigpralskacnismqqarevvqtcphcnsapaleagvNprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsQgqAmveRanRllkdkirvlaegdgfmkriptskqgellakamyalnhfergEntktpiqkhwrptvltegppvkirietgewekgwnvlvwgRgyaavknrdtdkviwvpsrkvkpdi > 7kui_F interface= gplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwAtaiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdkirvlaegdgfmkriptskqgellakamyalnhfergentKtpIqkhWrpTvltegppvkirietgewekgwnvlvwgrgyaavknrdtdkvIwvpsrkvkpdi
interface signature	NQARRER/AKIWTI

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# IC=5.807 IC/col=0.968 n_of_columns=6

A |  13   0   0   0   0  13
C |  13   0   0   0   0  13
G |  13  96   0   0  96  16
T |  57   0  96  96   0  54

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updated Wed Sep 11 07:10:59 2024