7l4v_AB : 3D-footprint complex

structure name	C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA BOUND TO DNA WITH CONSENSUS RECOGNITION WITH GT MISMATCH
reference	Horton et al. 'Nucleic 49 5084 2021
source	Homo sapiens
experiment	X-ray (resolution=1.75, R-factor=?)
structural superfamily	Leucine zipper domain;
reference complex	6mg1_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7l4v_A interface=10,11,14,17,18,21,22, mkhsdeykiRRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkq > 7l4v_B interface=11,14,15,17,18,21,22, mkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe
interface signature	RRNAVSR/RNNAVSR

Estimated binding specificities ?

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# IC=11.660 IC/col=0.972 n_of_columns=12

specificity:

A |  14   0  56   0   0  61   1   0   0  96  96   3
C |  17   0  10   0   0   0  67   0  96   0   0  14
G |  53  96  20   0   0  32   0  96   0   0   0   8
T |  12   0  10  96  96   3  28   0   0   0   0  71

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updated Wed Sep 11 07:11:12 2024