7l4v_AB : 3D-footprint complex

structure name	C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA BOUND TO DNA WITH CONSENSUS RECOGNITION WITH GT MISMATCH
reference	Horton et al. 'Nucleic 49 5084 2021
source	Homo sapiens
experiment	X-ray (resolution=1.75, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7l4v_A interface=10,11,14,17,18,21,22, mkhsdeykiRRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkq > 7l4v_B interface=11,14,15,17,18,21,22, mkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe
interface signature	RRNAVSR/RNNAVSR

Estimated binding specificities ?

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# IC=13.000 IC/col=1.083 n_of_columns=12

specificity:

A |   7   7  73   0   0   0   0   0   0  96  96   9
C |   7   7   7   0   0   0   0   0  96   0   0   7
G |  75  75   9   0   0  96   0  96   0   0   0   7
T |   7   7   7  96  96   0  96   0   0   0   0  73

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updated Sun Dec 15 07:37:13 2024