7lbw_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TFAM (MITOCHONDRIAL TRANSCRIPTION FACTOR A) BRIDGING TWO NON-SEQUENCE SPECIFIC DNA SUBSTRATES
reference	Garcia-Diaz et al. 'Nucleic 50 322 2022
source	Homo sapiens
experiment	X-ray (resolution=2.84, R-factor=?)
structural superfamily	HMG-box;
reference complex	3tmm_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7lbw_A interface=12,14,15,18,19,22,34,35,38,100,104,114,119,120,123,127,135,136,139,191, svlascpkkpvSsYLrfSKeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkaMtkkKeltllgkpkRprsaYNvyVaerFqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrrTik > 7lbw_B interface=12,14,15,18,22,34,35,38,100,104,114,119,120,123,127,135,136,139, svlascpkkpvSsYLrfSkeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkaMtkkKeltllgkpkRprsaYNvyVaerFqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrr
interface signature	SYLSKLTTIMKRYNVFPQLT/SYLSLTTIMKRYNVFPQL

Estimated binding specificities ?

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# IC=27.894 IC/col=0.734 n_of_columns=38

specificity:

A |   0   0   0   0  24   9   1  24  24  24  76   0   0   0   0  24  24  24  24   1   7  67  24   0  96   0   0   7  24  67  24  94  24  24  96  96   0   0
C |  96  96   0   0  24  77   4  24  24  24   7   0  96   0  96  24  24  24  24  90  11   9  24   0   0   0  96  10  24  11  24   0  24  24   0   0   0   0
G |   0   0   0   0  24   5   1  24  24  24   8  96   0   0   0  24  24  24  24   1   9   9  24  96   0  96   0   7  24  11  24   0  24  24   0   0  96  96
T |   0   0  96  96  24   5  90  24  24  24   5   0   0  96   0  24  24  24  24   4  69  11  24   0   0   0   0  72  24   7  24   2  24  24   0   0   0   0

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updated Fri Jun 26 12:27:55 2026