| structure name | TFAM IMPOSES A U-TURN ON MITOCHONDRIAL DNA (Transcription factor A, mitochondrial) |
| reference | Kaiser et al. Nat.Struct.Mol.Biol. 18 1290 2011 |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.50, R-factor=0.197) |
| structural superfamily | HMG-box; |
| sequence family | HMG high mobility group box; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | KSYLSLTTIMKRYNVFPQL |
Estimated binding specificities ?
| readout + contact |  |
A | 96 0 79 5 24 5 24 24 24 24 24 0 0 96 91 5 5 C | 0 96 5 7 24 73 24 24 24 24 24 96 96 0 0 79 5 G | 0 0 7 79 24 7 24 24 24 24 24 0 0 0 5 5 7 T | 0 0 5 5 24 11 24 24 24 24 24 0 0 0 0 7 79scan! |
Dendrogram of similar interfaces ?
matrix formatKASTYGLASGLA--TGTCIT--KGRTYANTVTFGPGQC--LC L +3tmm_A +-----------------------1 --STYGLCSGLAKTTGTCIGMGKGRTYANTVTFGPGQC--LC +-3 +7lbx_A ! ! RCNTFTMA--RAHGNAACST---------------------- L +-4 +-----------------------4euw_A ! ! RTNGFTIA--RA--NASGST---------------------- L +-5 +-------------------------1j46_A ! ! RCNGFTMA--RTHTNG--ST---------------------- L --6 +--------------------------6t90_L ! RGNTFTMA--RT--NGRTSA---------------------- L ! +---------------7m5w_A +-----------2 ------------------------RCFAFTCG--IC--VGAG L +---------------2gzk_A |
home
updated Fri Sep 13 17:42:46 2024