7lvv_AC : 3D-footprint complex

structure name	CRYOEM STRUCTURE DRDV-DNA COMPLEX
source	DEINOCOCCUS WULUMUQIENSIS
experiment	NMR
structural superfamily	S-adenosyl-L-methionine-dependent methyltransferases;
reference complex	7lvv_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7lvv_A interface=303,437,439,440,443,474,475,477,536,537,543,549,551,553,555,556,653,655,703,743,744,746,784,785, slqlvkkfqkrledivayggtrnessvraafqqllsdwaegsglrlitevtqkavagnnvrpdgtlkdslqqsrgyweskdeadtlddeiqkklakgyprdniifedsrlavlmqngeevqrvdmgdagalagllklffefeppqvlefrkavdhfkdemphllkilreaadaaeqkadyrgerdhfveiakeainpdfsprdaremliqhiltgdlftsvfdnaqyhednniaqqlqqlaatfykgpvkrdiaertkryygaiqaaaaqiadhhekqrflkalyenfyraynpagaerlgiFytpgeivrfmieatdtllekhfqkeladkgveildpatgtgtfitelidflpkakleqkyreelhcnelallpyyianlnieatyaqkmgryeefrnivlvdtldntlfgsvtaenlerakrqnarpvrviigNpPYraNqanendnnknreykeidrrikatyvaastaQKtKlydmysrflrwatdrlkedgivafvsnssfidsrtfdgfrkevvkdfdhiyildmkgnANtsgerRkreggNvFnDqIKvgvavyflvrsadtkiwyhavpdfwrareklewlkttkfediefdhirpdakhnwlgqvdeendwneflpvadkdtkqakglgqeraifklyslgvVtNrdewvysraedeladkvryfigryneiiklplgdlmsrnwegdikmtRatiadaqsrksysleknsivpslyrpfdvlkmyfsknlnEMqYqmpsifpkgvgenvvialsgspaakpfqvlatdilpsLDllektqclpfyrytmngerlnnitdyalkafqthyadtsisredifhyvyavlhhpayrekyalnlrqefpripfypefgrwaawgrelmalhigfesvapyplkrtdeppkndtpealalakkarlkvqrdaakqptgaveldglttlagipaaawayklgnrsalewvlerhkettpkdatirekfntyrfadhkervidllarvttvsvetvrivgempaetm > 7lvv_C interface=61, slqlvkkfqkrledivayggtrnessvraafqqllsdwaegsglrlitevtqkavagnnvRpdgtlkdslqqsrgyweskdeadtlddeiqkklakgyprdniifedsrlavlmqngeevqrvdmgdagalagllklffefep
interface signature	FNPYNQKKANRNFDIKVNREMYLD/R

Estimated binding specificities ?

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# IC=11.096 IC/col=0.616 n_of_columns=18

specificity:

A |   0  24  24  24  24  24  24  24  24   0   0   0  13  13  96   0   0   0
C |   0  24  24  24  24  24  24  24  24   0   0   0  54  54   0   0   0   0
G |  96  24  24  24  24  24  24  24  24  96  96   0  16  16   0   0  96  96
T |   0  24  24  24  24  24  24  24  24   0   0  96  13  13   0  96   0   0

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updated Sun Dec 15 08:06:16 2024