7lvv_AC : 3D-footprint complex

structure name	CRYOEM STRUCTURE DRDV-DNA COMPLEX
source	DEINOCOCCUS WULUMUQIENSIS
experiment	NMR
structural superfamily	S-adenosyl-L-methionine-dependent methyltransferases;
reference complex	7lvv_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7lvv_A interface=303,437,439,440,443,474,475,477,536,537,543,549,551,553,555,556,653,655,703,743,744,746,784,785, slqlvkkfqkrledivayggtrnessvraafqqllsdwaegsglrlitevtqkavagnnvrpdgtlkdslqqsrgyweskdeadtlddeiqkklakgyprdniifedsrlavlmqngeevqrvdmgdagalagllklffefeppqvlefrkavdhfkdemphllkilreaadaaeqkadyrgerdhfveiakeainpdfsprdaremliqhiltgdlftsvfdnaqyhednniaqqlqqlaatfykgpvkrdiaertkryygaiqaaaaqiadhhekqrflkalyenfyraynpagaerlgiFytpgeivrfmieatdtllekhfqkeladkgveildpatgtgtfitelidflpkakleqkyreelhcnelallpyyianlnieatyaqkmgryeefrnivlvdtldntlfgsvtaenlerakrqnarpvrviigNpPYraNqanendnnknreykeidrrikatyvaastaQKtKlydmysrflrwatdrlkedgivafvsnssfidsrtfdgfrkevvkdfdhiyildmkgnANtsgerRkreggNvFnDqIKvgvavyflvrsadtkiwyhavpdfwrareklewlkttkfediefdhirpdakhnwlgqvdeendwneflpvadkdtkqakglgqeraifklyslgvVtNrdewvysraedeladkvryfigryneiiklplgdlmsrnwegdikmtRatiadaqsrksysleknsivpslyrpfdvlkmyfsknlnEMqYqmpsifpkgvgenvvialsgspaakpfqvlatdilpsLDllektqclpfyrytmngerlnnitdyalkafqthyadtsisredifhyvyavlhhpayrekyalnlrqefpripfypefgrwaawgrelmalhigfesvapyplkrtdeppkndtpealalakkarlkvqrdaakqptgaveldglttlagipaaawayklgnrsalewvlerhkettpkdatirekfntyrfadhkervidllarvttvsvetvrivgempaetm > 7lvv_C interface=61, slqlvkkfqkrledivayggtrnessvraafqqllsdwaegsglrlitevtqkavagnnvRpdgtlkdslqqsrgyweskdeadtlddeiqkklakgyprdniifedsrlavlmqngeevqrvdmgdagalagllklffefep
interface signature	FNPYNQKKANRNFDIKVNREMYLD/R

Estimated binding specificities ?

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# IC=10.397 IC/col=0.578 n_of_columns=18

specificity:

A |   8   0  96   0   8   0  96   0   0  24  24  24  24  24  24  24  24   8
C |  72  96   0   0   8   0   0  96  88  24  24  24  24  24  24  24  24  72
G |   8   0   0   8  72  96   0   0   0  24  24  24  24  24  24  24  24   8
T |   8   0   0  88   8   0   0   0   8  24  24  24  24  24  24  24  24   8

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updated Wed Sep 11 07:38:07 2024