7nx5_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE EPSTEIN-BARR VIRUS PROTEIN ZEBRA (BZLF1, ZTA) BOUND TO A METHYLATED DNA DUPLEX
reference	Bernaudat et al. 'Nucleic 50 490 2022
source	Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8)
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Leucine zipper domain;
reference complex	2c9l_Z
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7nx5_A interface=5,9,12,13,16,17, mleiKrykNrvASrkSRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtp > 7nx5_B interface=3,7,10,11,14,15, eiKrykNrvASrkSRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtpd
interface signature	KNASSR/KNASSR

Estimated binding specificities ?

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# IC=8.333 IC/col=0.926 n_of_columns=9

specificity:

A |   0   0   0   0   0   0  73  11  67
C |  11  22   0  96   0  96  13  11  11
G |   5   0  96   0   0   0   5  63   7
T |  80  74   0   0  96   0   5  11  11

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updated Sun Dec 15 10:37:52 2024