7ogs_AB : 3D-footprint complex

structure name	X-RAY STRUCTURE OF INTERFERON REGULATORY FACTOR 4 DNA BINDING DOMAIN BOUND TO AN INTERFERON-STIMULATED RESPONSE ELEMENT
reference	Agnarelli et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=2.37, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7oot_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7ogs_A interface=76,79,80,83,84, gngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalNKsndfeelversqldisdpykvyrivpegak > 7ogs_B interface=76,79,80,83,84, gngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalNKsndfeelversqldisdpykvyrivpegak
interface signature	TRCNK/TRCNK

Estimated binding specificities ?

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# IC=12.325 IC/col=1.027 n_of_columns=12

specificity:

A |   4   0   0   5   4   5   5   0   0   4   4  96
C |  83   0   0   4  83   4   4   0   0   4  83   0
G |   4   0   0   4   4  83  83   0   0   9   4   0
T |   5  96  96  83   5   4   4  96  96  79   5   0

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updated Wed Jan 7 06:54:51 2026