interface graph thumbnail
legend  pdf

structure nameX-RAY STRUCTURE OF INTERFERON REGULATORY FACTOR 4 DNA BINDING DOMAIN BOUND TO AN INTERFERON-STIMULATED RESPONSE ELEMENT
referenceAgnarelli et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=2.37, R-factor=?)
structural superfamily"Winged helix" DNA-binding domain;
reference complex7oot_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTRCNK/TRCNK

Estimated binding specificities ?

readout + contactlogo
# IC=12.482 IC/col=1.040 n_of_columns=12 specificity:   
A |   0   4  80  96  96   4   6   4  82  96  96   4
C |   0   4   4   0   0  84  82   0   6   0   0   4
G |   0  82   8   0   0   4   4  87   4   0   0  84
T |  96   6   4   0   0   4   4   5   4   0   0   4
scan!

home
updated Wed Sep 11 10:59:48 2024