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legend  pdf

structure nameCRYSTAL STRUCTURE OF KOD DNA POLYMERASE IN A TERNARY COMPLEX WITH A P/T DUPLEX CONTAINING AN EXTENDED 5' SINGLE STRANDED TEMPLATE OVERHANG
(DNA POLYMERASE)
referenceDiederichs et al. Chembiochem 22 3060 2021
sourceTHERMOCOCCUS KODAKARENSIS KOD1
experimentX-ray (resolution=2.01, R-factor=0.202)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family B; DNA polymerase family B, exonuclease do;
reference complex7om3_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKR

Estimated binding specificities ?

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# IC=2.250 IC/col=0.562 n_of_columns=4 specificity:   
A |   7   7   7   9
C |   9   7   9  73
G |   7  73  73   7
T |  73   9   7   7
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updated Sat Aug 2 18:04:07 2025