Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCENP-A NUCLEOSOME IN COMPLEX WITH CENP-C
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes6uph_ABCDEFGH 7on1_abcdefgh
redundant complexes6uph
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  LTRC                                    +3kwq_E    
                  +-----------------------1 
  LGRA   L        !                       +8he5_a    
                  ! 
  --RG            !                +------7uv9_E    
               +--7        +-------4 
  --RA         !  !        !       !   +--7xsx_a    
               !  !  +-----5       +---3 
  --RC         !  !  !     !           +--6qld_f    
               !  !  !     ! 
  --RT       +-8  +--6     +--------------8cww_A    
             ! !     ! 
  LT--       ! !     !                  +-7ywx_E    
             ! !     +------------------2 
  --RT     --9 !                        +-8siy_G    
             ! ! 
  LARG       ! +--------------------------7unc_a    
             ! 
  LC--       +--------------------------8bvw_e    
           

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updated Tue Dec 19 19:27:29 2023