Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCENP-A NUCLEOSOME IN COMPLEX WITH CENP-C
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes6uph_ABCDEFGH 7on1_abcdefgh
redundant complexes6uph
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ------RC--       +-----------------------------7ux9_E    
                   !  
  LC--------       !                               +8bvw_e    
                   !            +------------------1 
  ------RT--       !            !                  +6px1_A    
                   !            ! 
  LA----RG--       !            !            +------7unc_a    
                   !            !     +------5 
  ------RA--       !        +---8     !      !   +--7xsx_a    
                 -11        !   !     !      +---4 
  ------RA--       !        !   !   +-6          +--7e9c_F    
                   !        !   !   ! ! 
  ------RG--       !        !   !   ! !             +8txv_G    
                   !        !   +---7 +-------------2 
  ------RG--       !      +-9       !               +8upf_G    
                   !      ! !       ! 
  ------RARA       !      ! !       !              +6a5l_g    
                   !      ! !       +--------------3 
  ------RC--       +-----10 !                      +7yqk_C    
                          ! ! 
  ------RT--              ! +----------------------8u14_G    
                          !  
  --HGRTRG--              +----------------------8rbx_V    
                 

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updated Sat Jan 10 16:04:44 2026