Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCENP-A NUCLEOSOME IN COMPLEX WITH CENP-C
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes6uph_ABCDEFGH 7on1_abcdefgh
redundant complexes6uph
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  LARG----                              +7unc_a    
                         +--------------1 
  --RT----               !              +8grq_A    
                    +----9 
  LC------          !    !             +8bvw_e    
                 +-12    +-------------4 
  LCRT----       !  !                  +8hr1_E    
                 !  !  
  --RA--RA       !  +-------------------6a5l_g    
                 !  
  --RA----       !                 +--7xsx_a    
               -13          +------6 
  ----RA--       !          !      +--6g0l_D    
                 !    +-----7 
  --RC----       !    !     !        +6qld_f    
                 !    !     +--------5 
  --RT----       !    !              +8u14_G    
                 !    !  
  --RG----       +---11                   +8txv_G    
                      !    +--------------2 
  --RG----            !    !              +5x0y_G    
                      !  +-8 
  --RA----            !  ! !              +1zla_C    
                      +-10 +--------------3 
  --RG----               !                +8ox0_C    
                         !  
  --RG----               +---------------8jla_C    
               

home
updated Sun Aug 3 17:27:05 2025