7oot_AB : 3D-footprint complex

structure name	X-RAY STRUCTURE OF INTERFERON REGULATORY FACTOR 4 DNA BINDING DOMAIN BOUND TO AN INTERFERON-STIMULATED RESPONSE ELEMENT
reference	Agnarelli et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=2.25, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7oot_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7oot_A interface=77,78,81,82, gklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwktrlRCalNKsndfeelversqldisdpykvyrivpega > 7oot_B interface=74,77,78,81,82, gklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalNKsndfeelversqldisdpykvyrivpega
interface signature	RCNK/TRCNK

Estimated binding specificities ?

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# IC=11.065 IC/col=1.006 n_of_columns=11

specificity:

A |   0  11  71  85  80   0   0   0  81   0  81
C |   0  10   5   5   6  96  96   0   5   0   5
G |   0  75  10   6   5   0   0  96   5  96   5
T |  96   0  10   0   5   0   0   0   5   0   5

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updated Fri Jun 26 17:05:20 2026