7pik_ABC : 3D-footprint complex

Interface of input file ?

structure name	CRYO-EM STRUCTURE OF E. COLI TNSB IN COMPLEX WITH RIGHT END FRAGMENT OF TN7 TRANSPOSON
source	ESCHERICHIA COLI
experiment	NMR
structural superfamily	Ribonuclease H-like;
reference complex	7pik_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7pik_A interface=115,116,117,118,120,143,150, mwqinevvlfdndpyrilaiedgqvvwmqisadkgvpqaraelllmqyldegrlvrtddpyvhldleepsvdsvsfqkreedyrkilpiinskdrfdpkvrselvehvvqehkvTKATvYkllrrywqrgqtpnalipdyknSgapgerRs > 7pik_B interface=115,116,117,118,120,140,143,150,158,160,220,224, mwqinevvlfdndpyrilaiedgqvvwmqisadkgvpqaraelllmqyldegrlvrtddpyvhldleepsvdsvsfqkreedyrkilpiinskdrfdpkvrselvehvvqehkvTKATvYkllrrywqrgqtpnalipdYknSgapgerRsatgtakIgRaregegtkvtpeierlfrltiekhllnqkgtkttvayrrfvdlfaqyfpripqedyptlRqfrYfydreypkaalgpgsryeidatiadiylvdhhdrqkiigrptlyividvfsrmitgfyigfenpsyvvamqafvnacsdktaicaqhdieisssdwpcvglpdvlladrgelmshqvealvssfnvrvesapprrgdakgivestfrtlqaefksfapgaslsvfeftqiilrtilfrnnhlvmdkydrdadfptdlpsipvqlwqwgmqhrtgslraveqeqlrvallprrkvsissfgvnlwglyysgseilregwpqhleaaydpvlvdtiylfpqvgsrvfwrcnltersrqfkglsfwevwdiqaqekhnka > 7pik_C interface=34,116,117,120,140,143,150,205,208,209, mwqinevvlfdndpyrilaiedgqvvwmqisadKgvpqaraelllmqyldegrlvrtddpyvhldleepsvdsvsfqkreedyrkilpiinskdrfdpkvrselvehvvqehkvtKAtvYkllrrywqrgqtpnalipdYknSgapgerRgtkvtpeierlfrltiekhllnqkgtkttvayrrfvdlfaqyfpripqedyptlRqfRYfydreypkalgpgsryeidatiadiylvdhhdrqkiigrptlyividvfsrmitgfyigfenpsyvvamqafvnacsdktaicaqhdieisssdwpcvglpdvlladrgelmshqvealvssfnvrvesapprrgdakgivestfrtlqaefksfapgiaslsvfeftqiilrtilfrnnhlvmdkydrdadfptdlpsipvqlwqwgmqhrtgslraveqeqlrvallprrkvsissfgvnlwglyysgseilregwlqrstqhleaaydpvlvdtiylfpqvgsrvfwrcnltersrqfkglsfwevwdiqaqekhnkanakqdeltkrreleafiqqtiqkankl
interface signature	TKATYSR/TKATYYSRIRRY/KKAYYSRRRY

Estimated binding specificities ?

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# IC=25.630 IC/col=0.475 n_of_columns=54

specificity:

A |   0  24  24  24  24  24  24  24  24  24   3   0  90  24   0   0   9  24  76  24  24   0   1  24  24  24  24  24  24   5  24  72   0  24   1   0   0   0  24  24  24   0  24  24  24  24  24  24  24   0   1   0   0  96
C |   0  24  24  24  24  24  24  24  24  24   1   0   4  24   0   0  12  24   9  24  24   0   0  24  24  24  24  24  24  72  24  10  86  24   2   0   0   0  24  24  24   0  24  24  24  24  24  24  24  95  82   1   0   0
G |  96  24  24  24  24  24  24  24  24  24   0   0   1  24   0  96   1  24   5  24  24  96   9  24  24  24  24  24  24  10  24   5   1  24   1   0  96   0  24  24  24   0  24  24  24  24  24  24  24   1   4   3   0   0
T |   0  24  24  24  24  24  24  24  24  24  92  96   1  24  96   0  74  24   6  24  24   0  86  24  24  24  24  24  24   9  24   9   9  24  92  96   0  96  24  24  24  96  24  24  24  24  24  24  24   0   9  92  96   0

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updated Fri Jun 26 18:06:37 2026