interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF THE CLR-CAMP-DNA COMPLEX
(Putative cAMP-binding protein-catabolite gene activator)
referenceEssen et al. 'To ? ? ?
sourceSinorhizobium meliloti 1021
experimentX-ray (resolution=3.12, R-factor=0.291)
structural superfamilycAMP-binding domain-like;"Winged helix" DNA-binding domain;
sequence familyCyclic nucleotidebinding domain; Bacterial regulatory proteins, crp famil;
reference complex7pza_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSRPKN

Estimated binding specificities ?

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# IC=1.323 IC/col=0.221 n_of_columns=6 specificity:   
A |  10   9  13  21  34  14
C |  10   9  14  21  20  52
G |  10  67  13  23  22  16
T |  66  11  56  31  20  14
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updated Fri Sep 13 07:11:21 2024