interface graph thumbnail
legend  pdf

structure nameTRANSCRIPTION FACTOR CDX2 BOUND TO HYDROXYMETHYLATED DNA
(Homeobox protein CDX-2)
referenceMorgunova et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=3.20, R-factor=0.240)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
reference complex6es3_K
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYRIQN

Estimated binding specificities ?

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# IC=3.968 IC/col=0.661 n_of_columns=6 specificity:   
A |  11  24   9  96  96  67
C |   9  24  11   0   0  11
G |   9  24   9   0   0   9
T |  67  24  67   0   0   9
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updated Tue Dec 17 12:39:47 2024