interface graph thumbnail
legend  pdf

structure nameI-ONUI_E-HPD1-F FINAL STAGE REENGINEERED VARIANT OF I-ONUI
(I-ONUI_E-HPD1-F)
referenceStoddard et al. 'To ? ? ?
sourceSYNTHETIC CONSTRUCT
experimentX-ray (resolution=2.37, R-factor=0.206)
structural superfamilyHoming endonucleases;
sequence familyLAGLIDADG endonuclease;
reference complex7rcf_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSSRHRTMLNYYWSFRRRESYRWQRE

Estimated binding specificities ?

readout + contactlogo
# IC=19.893 IC/col=0.947 n_of_columns=21 specificity:   
A |   3   0   0   0   0   0   0   7   0  24  74   7   1   0  24  17  96   0  24   0   3
C |  81   0  96  96   0   0   0   3   0  24   7   7   3   0  24  67   0   0  24  96  83
G |   5  96   0   0   0  96   0  83  96  24   7   8   0   0  24   7   0   0  24   0   3
T |   7   0   0   0  96   0  96   3   0  24   8  74  92  96  24   5   0  96  24   0   7
scan!

home
updated Mon Dec 18 23:49:58 2023