7rcg_A : 3D-footprint complex

structure name	I-ONUI_E-HPD1-F FINAL STAGE REENGINEERED VARIANT OF I-ONUI (I-ONUI_E-HPD1-F)
reference	Stoddard et al. 'To ? ? ?
source	SYNTHETIC CONSTRUCT
experiment	X-ray (resolution=2.37, R-factor=0.206)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
reference complex	7rcf_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7rcg_A interface=19,23,27,34,36,40,42,64,66,70,76,134,174,176,178,180,185,191,193,215,220,222,224,226,228, rresinpwtltgfadaegSfglSilnRrgtaryHtRlsfTiMlhnkdksileniqstwkvgsiLnNgdhYvslvvYafedlkviidhfekyplitqklgdyklfkqafsvmenkehlkengikelvrikakmnWglndelkkafpevisrerplinknipngkwlagftsgdgSfFvRlRksrvRvqlvfEiSqhirdknlmnslitylgcghiYegnkRsWlQfRvEkfsdindkiipvfqentligmkledfedwckvaklieekkhltesgldeikkiklnmnk
interface signature	SSRHRTMLNYYWSFRRRESYRWQRE

Estimated binding specificities ?

readout + contact

# IC=20.312 IC/col=0.967 n_of_columns=21

specificity:

A |   4   0  21  96   0   4  24  96  91  82  16  24   0   2  96   0  96   0   0   0   4
C |   7   0  57   0   0   4  24   0   1   7   7  24  96  86   0  96   0   0   0  96   4
G |  81  96   6   0   0  38  24   0   4   0   7  24   0   4   0   0   0  96  96   0  84
T |   4   0  12   0  96  50  24   0   0   7  66  24   0   4   0   0   0   0   0   0   4

scan!

home
updated Tue Dec 17 12:58:44 2024