7rcf_A : 3D-footprint complex

structure name	FOURTH STAGE REENGINEERED VARIANT OF I-ONUI WITH STABILITY ENHANCING SUBSTITUTIONS (I-ONUI_E-HPD1-E)
reference	Ubilla-Rodriguez et al. 'To ? ? ?
source	SYNTHETIC CONSTRUCT
experiment	X-ray (resolution=2.23, R-factor=0.193)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
redundant complexes	7rcc_D 7rcd_A 7rce_A 7rcg_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7rcf_A interface=18,22,24,26,29,31,35,37,59,61,65,71,129,169,171,173,175,184,186,190,192,214,221,223,225,227,229, resinpwtltgfadaegSfglSiLnRryHtRlsfTiMlhnkdksileniqstwkvgsiLnNgdhYvslvvYrfedlkviidhfekyplitqklgdyklfkqafsvmenkehlkengikelvrikakmnWglndelkkafpevisrerplinknipngkwlagftsgdgSfFvRlRksnvnarvRvQlvfEiSqhirdknlmnslitylgcghiYegnkseRsWlQfRvEkfsdindkiipvfqentligmkledfedwckvaklieekkhltesgldeikkiklnmnkrr
interface signature	SSLRHRTMLNYYWSFRRRQESYRWQRE

Estimated binding specificities ?

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# IC=18.627 IC/col=0.931 n_of_columns=20

specificity:

A |   0  24  96   3   3  24  96  89  72  11  24   0   3  96   0  96   0   0   0   3
C |   0  24   0   0   3  24   0   0  10   7  24  88  79   0  96   0   0   0  96   7
G |  96  24   0   0   7  24   0   7   7  13  24   3   7   0   0   0  96  96   0  83
T |   0  24   0  93  83  24   0   0   7  65  24   5   7   0   0   0   0   0   0   3

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Dendrogram of similar interfaces ?

matrix format

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updated Wed Dec 18 11:10:50 2024