7rh2_GH : 3D-footprint complex

structure name	IRF4 TRANSCRIPTION FACTOR MUTANT -K59R
reference	Casarotto et al.
source	Homo sapiens
experiment	X-ray (resolution=2.47, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7oot_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7rh2_G interface=75,78,79,83, ngklrqwlidqidsgkypglvweneeksifripwkhagrqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelversqldisdpykvyrivp > 7rh2_H interface=39,78,79,83, ngklrqwlidqidsgkypglvweneeksifripwkhagRqdynreedaalfkawalfkgkfregidkpdpptwktrlRCalnKsndfeelversqldisdpykvyrivp
interface signature	TRCK/RRCK

Estimated binding specificities ?

readout + contact

# IC=11.161 IC/col=1.015 n_of_columns=11

specificity:

A |   0   0  12   5   0   0   0   5   5   7  96
C |   0  96  11  81   0   0   0   5  11  84   0
G |   0   0  11   5  96  96   0   7  13   0   0
T |  96   0  62   5   0   0  96  79  67   5   0

scan!

home
updated Sun Dec 17 11:34:10 2023