interface graph thumbnail
legend  pdf

structure nameKOD-RI INCORPORATING DNA, N+2
(DNA polymerase)
referenceChaput et al. 'Nucleic 50 9663 2022
sourceThermococcus kodakarensis
experimentX-ray (resolution=2.71, R-factor=0.164)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family B; DNA polymerase family B, exonuclease do;
reference complex7om3_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYKR

Estimated binding specificities ?

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# IC=2.431 IC/col=0.608 n_of_columns=4 specificity:   
A |   7   7   7  75
C |   7  75   7   7
G |  75   7  75   7
T |   7   7   7   7
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updated Fri Sep 13 07:33:27 2024