interface graph thumbnail
legend  pdf

structure nameCRYO-EM STRUCTURE OF ADNA-ADNB(W325A) IN COMPLEX WITH DNA AND AMPPNP
sourceMYCOLICIBACTERIUM SMEGMATIS
experimentNMR
structural superfamilyP-loop containing nucleoside triphosphate hydrolases;
reference complex6ppr_A 6ppr_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRSSN/FRHLRFYRHR

Estimated binding specificities ?

contactlogo
# IC=10.245 IC/col=0.301 n_of_columns=34 specificity:   
A |   0   0   7  24  24  24  24  24  24  24  24  24   7  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0   9   0   7
C |   0   0   7  24  24  24  24  24  24  24  24  24   9  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0   7   0   9
G |   0   0   9  24  24  24  24  24  24  24  24  24  73  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0   7  96   7
T |  96  96  73  24  24  24  24  24  24  24  24  24   7  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  96  96  96  73   0  73
scan!

home
updated Sun Dec 17 11:57:02 2023