7sjr_AB : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF ADNA-ADNB(W325A) IN COMPLEX WITH DNA AND AMPPNP
source	MYCOLICIBACTERIUM SMEGMATIS
experiment	NMR
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;
reference complex	6ppr_A 6ppr_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7sjr_A interface=710,711,819,901, llepgsngvvrllggpgtgkssllvdtavqhdpesvllltgsarlrtaaraaitarlgvvreplvrtvhsyafavlrlaaqtsaeqdgiirellagdledgwpeqlwpalttagfatelrdlmarctergvdpialqrlgrtakrpewlaagrfaqayeqimlaaelvgaalealgaddelldternriklllvddaqhldpqaarlvralaagtgltviagdpdqsvfvllrddthpaitltqsyrcapeiasaitglgqrltrhwtgnpqregtvtvrlaasthaegtmiadalrrahlvdgipwsqmavivrsvpgtalaraltaagvpvqdvpvgrqpaaaalltvldvtatghldadsavalltgpigrvdpvtlrqlrralrradgsqpprdfgdllvdaierepkglsaehartlrrlravltaarrsdarytlwqawhasglqrrwlaaservgaqadrdldavttlfdvadqyvnrlrglvdhvtraeavavlsvhgalagewdfvviagvqeglwpnmiprggvlgtqhlvdvldgvadmtdrtvstraplvaeerrllmaamgrartrvmitavdsdtgllpspfcaeisawatepplvaprvlapsalvgrlravvcapavdddaracaaaqlarlaaagvpgadpsqwhamtsltteeplwsehvvtlspstlqmltdcplrwllerhggddgrdvRStvgslvhalvseptesqlvnelekvwddlpydakwysdnelarhramletftrwredtrrqltevateipvegivveppgvrvrgrldrlerdeagrlvvvdlktgkSpvtkddaqnhaqlamyqlavaagllddepgggklvylgkatereqdpltpdkraewletvgeaaaatagprfvarvnngcaNcpvrsscpaq > 7sjr_B interface=68,70,102,124,190,230,299,397,620,693, ryspvelsaalglfpptdeqaaviaappgplvviagagagktetmaarvvwlvangfatpsqvlgltFtRkaagqllrrvrtrlarlagagsdesatvstyHafagtllrehglllpvepdtrLlsetelwqlaydvvcahpghldtektpaavtamvlrlsgalaehlvdtdqlrdthvelerlvhtqRdrgpsqwllrmlatqtertelvplidalhqrmraekvmdFgmqmaaaarlaarfpqvgeqlrqrfrvvlldeyqdtghaqrialsslfgggaddglaltavgdpiqsiYgtnlprfttdfpysdgtpaptlelrtswrnppstlhvanavseealrprpdaepgtircallnnvaaerdwvadhlarayhgaigrgeaaptaavlvRrnadaapmaealtargvpvevagllavpevadlvamlrliadptagsavmriltgprwrfgardiaalwrravelddrplgtadivaqaapdadtacvadaicdpgdaeryspagyerivalgreltmlrahlghplpelvaevrrvlgldaearaarpvaagwagtenldrfsdlvsdfaghagasvsallayldaavevenglapaeltvshdrvqiltvHaakglewqvvavphlsarvfpsttqartwltdasdlppllrgdrateseigvpvrkilsdkisdhkksldqrRvdeerrllyvaitraedtlllsghhwgateskprgpseflcelktileeatcgeiehwapdpplrdqvvealwppvdhvhrgaqlvaaamagqegwaadvdallaerer
interface signature	RSSN/FRHLRFYRHR

Estimated binding specificities ?

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# IC=10.245 IC/col=0.301 n_of_columns=34

specificity:

A |   0   0   7  24  24  24  24  24  24  24  24  24   9  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0   9   0   9
C |   0   0   9  24  24  24  24  24  24  24  24  24   7  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0   7   0   7
G |   0   0   7  24  24  24  24  24  24  24  24  24  73  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0   7  96   7
T |  96  96  73  24  24  24  24  24  24  24  24  24   7  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  96  96  96  73   0  73

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updated Wed Sep 11 13:23:49 2024