7t8k_AB : 3D-footprint complex

structure name	BRXR FROM ACINETOBACTER BREX TYPE I PHAGE RESTRICTION SYSTEM BOUND TO DNA
reference	Stoddard et al. 'Nucleic 50 5171 2022
source	ACINETOBACTER SP. NEB 394
experiment	X-ray (resolution=2.30, R-factor=?)
reference complex	7t8k_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7t8k_A interface=35,36,37,38,40,62, adkhevllrmraiellaywegrlvttrlmnwfglSRQQaSadikryntlynpdalihdpsvKgyvpkasfqpvlttahineylnmlsglvseshaliampepnlaavqlpdrsvrpevirevlracrnqstlkmiyasmqnpqwheriisphtlvytgfrwhvraychqskqfkdfllsridrtpvvvaiesvdpaqdqqwheeivltlipnpklnssqqalvekdfgmpdgrlqipvkkalahytlqryqtaitlaeaedalkyplvlqrsdieklssylfdqas > 7t8k_B interface=35,36,37,38,40,57,62, adkhevllrmraiellaywegrlvttrlmnwfglSRQQaSadikryntlynpdaliHdpsvKgyvpkasfqpvlttahineylnmlsglvseshaliampepnlaavqlpdrsvrpevirevlracrnqstlkmiyasmqnpqwheriisphtlvytgfrwhvraychqskqfkdfllsridrtpvvvaiesvdpaqdqqwheeivltlipnpklnssqqalvekdfgmpdgrlqipvkkalahytlqryqtaitlaeaedalkyplvlqrsdiekl
interface signature	SRQQSK/SRQQSHK

Estimated binding specificities ?

readout + contact

# IC=14.659 IC/col=0.733 n_of_columns=20

specificity:

A |   0  92   2  94   0   0  90  74  24  24  24  24  24  21  24   0   9  96   0   0
C |   9   2  20   0   0   0   2   9  24  24  24  24  24   4  24   0   2   0  96   0
G |   1   2   9   0  96   0   2  11  24  24  24  24  24  18  24   0   2   0   0  96
T |  86   0  65   2   0  96   2   2  24  24  24  24  24  53  24  96  83   0   0   0

scan!

home
updated Thu Jul 31 20:52:22 2025