7t8k_AB : 3D-footprint complex

structure name	BRXR FROM ACINETOBACTER BREX TYPE I PHAGE RESTRICTION SYSTEM BOUND TO DNA
reference	Stoddard et al. 'Nucleic 50 5171 2022
source	ACINETOBACTER SP. NEB 394
experiment	X-ray (resolution=2.30, R-factor=?)
reference complex	7t8k_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7t8k_A interface=35,36,37,38,40,62, adkhevllrmraiellaywegrlvttrlmnwfglSRQQaSadikryntlynpdalihdpsvKgyvpkasfqpvlttahineylnmlsglvseshaliampepnlaavqlpdrsvrpevirevlracrnqstlkmiyasmqnpqwheriisphtlvytgfrwhvraychqskqfkdfllsridrtpvvvaiesvdpaqdqqwheeivltlipnpklnssqqalvekdfgmpdgrlqipvkkalahytlqryqtaitlaeaedalkyplvlqrsdieklssylfdqas > 7t8k_B interface=35,36,37,38,40,57,62, adkhevllrmraiellaywegrlvttrlmnwfglSRQQaSadikryntlynpdaliHdpsvKgyvpkasfqpvlttahineylnmlsglvseshaliampepnlaavqlpdrsvrpevirevlracrnqstlkmiyasmqnpqwheriisphtlvytgfrwhvraychqskqfkdfllsridrtpvvvaiesvdpaqdqqwheeivltlipnpklnssqqalvekdfgmpdgrlqipvkkalahytlqryqtaitlaeaedalkyplvlqrsdiekl
interface signature	SRQQSK/SRQQSHK

Estimated binding specificities ?

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# IC=13.312 IC/col=0.666 n_of_columns=20

specificity:

A |   2  87  24  90   0   0  79  87  24  24  24  24  24   8  24   2   5  96   0   4
C |   2   2  24   2   0   0   4   2  24  24  24  24  24  13  24   2   8   0  96   2
G |   2   2  24   2  96   0   2   5  24  24  24  24  24  11  24   5   2   0   0  90
T |  90   5  24   2   0  96  11   2  24  24  24  24  24  64  24  87  81   0   0   0

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updated Sun Dec 15 14:35:02 2024